DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cnot4 and AT3G45630

DIOPT Version :10

Sequence 1:NP_001260343.1 Gene:Cnot4 / 34416 FlyBaseID:FBgn0051716 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_190149.1 Gene:AT3G45630 / 823705 AraportID:AT3G45630 Length:989 Species:Arabidopsis thaliana


Alignment Length:1131 Identity:279/1131 - (24%)
Similarity:426/1131 - (37%) Gaps:307/1131 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CPLCMEPLEVDDLTFFPCTCGYQICRFCWHRI----RTDENK-LCPACRKEYPENPADFKPLSQE 72
            ||||.|.:::.|....||.||||||.:|||.|    ..|::: .|||||..|.:.......:.||
plant     9 CPLCAEEMDLTDQQLKPCKCGYQICVWCWHHIMDMAEKDQSEGRCPACRTPYDKEKIVGMTVDQE 73

  Fly    73 EMIAFKSQKRQRDQQRKQKITENRKHLANVRVVQKNLVFVVGLPPRLADADILKKHEYFGKYGKI 137
            .:.:..:..|::.|:.|.|.::.||.|.:|||||:|||::||||..|||.|:|::.||||:|||:
plant    74 RLASEGNMDRKKIQKSKPKSSDGRKPLTSVRVVQRNLVYIVGLPLNLADEDLLQRKEYFGQYGKV 138

  Fly   138 HKVVINPSTTYAG-VQVRVGPSASAYVTYVNNSDALRAIQSVNNIMIDGRLIKTSLGTTKYCSHF 201
            .||  :.|.|..| :|.....:.|.|:||....:|:|.||||:..::||:.:|...||||||..:
plant   139 LKV--SMSRTATGLIQQFPNNTCSVYITYGKEEEAIRCIQSVHGFILDGKALKACFGTTKYCHAW 201

  Fly   202 MKNQQCPKGDCMYLHELGDPEASFTKEEM---H------QGKHLEYEKRLHDTLIASLGPNATGI 257
            ::|..|...||:||||:|..|.||||:|:   |      .|.....:.|....|...|....:..
plant   202 LRNVACNNQDCLYLHEVGSQEDSFTKDEIISAHTRVQQITGATNTMQYRSGSMLPPPLDAYTSDS 266

  Fly   258 VNGNGASKANVAIPSSSSASSSSSGSGTNGSSASGNAQQKEAWPSLSVSPINGKEAAATATSSSG 322
            ..||..:|    :|||:|.|:..| |..:|||                    ||..|..|.:|.|
plant   267 STGNPIAK----VPSSTSVSAPKS-SPPSGSS--------------------GKSTALPAAASWG 306

  Fly   323 KSKREKLRNEKRHEKNKAKNKNGSNTNANASNKENYVPETRSSTSTETFAEATADAPASTKAEPP 387
                .:|.|:  |....:...|||..|            .||::...|.|.:|....|   |..|
plant   307 ----ARLTNQ--HSLATSALSNGSLDN------------QRSTSENGTLATSTVVTKA---ANGP 350

  Fly   388 QASSNRTRADRGKDRTTASAKEQKKSKEAAPAPAASKPAERVETSESTIRQKKAEVTESCEDNLP 452
            .:|||..:        .|..||:.:|......|...||          ::||.....||.....|
plant   351 VSSSNSLQ--------KAPLKEEIQSLAEKSKPGVLKP----------LQQKIVLDPESKRTTSP 397

  Fly   453 QKRLAGTNVQRSVS-----------SCSENSEGHVSE------------SSLSEKSLTGDYVEE- 493
            .:..:...:...|.           |..|||..|.||            :.::...:|.:..:| 
plant   398 NRDPSSNQISCLVESSYNSRVIDKPSAVENSLEHTSEIAEDVFDVGKLSADVAWMGITTNSRDET 462

  Fly   494 ---------KCNSVNSESQQESVKFQEELEKSNEAIVEAETILPTAESSEDISPAAVAPGNGEVE 549
                     .|:..:.......|:..|:..|.:.....||.         |||...:.....|.:
plant   463 PGVPVVIGTHCDLGSITQSDNDVQNLEQCRKQSPTNTYAEA---------DISLNGIHGSRPEWD 518

  Fly   550 ---GCLPVVDPVEPPSLAD----NGSR--VTDAL--------SKLNIFDDTPSFFTSPSFQQAPI 597
               |....:|..||..:.|    |.:|  :.:|:        |.::|.|.  :...|.|||....
plant   519 WRSGLQSQIDVKEPLEVNDFSSFNNNRRGIAEAVSHSTSKFSSSISILDS--NHLASRSFQNRET 581

  Fly   598 -------LKNKLDLEMRQSHLPDLVNDIDGIQKASNTNEWEEAFKNVMMGNTQHMEEQLLQQQHL 655
                   ..:..::...:.|||      :|..:.:.:|.....|.|....|.|:.|:.::..   
plant   582 SCGMDSKTGSSFEIGSDRLHLP------NGFSEKAMSNMEHSLFANEGRSNIQNTEDDIISN--- 637

  Fly   656 QQHQNLRHQLVLQQEEFLRMQELQKRNNFATQINGPANDFLRAYELRAQANAIIQQQLLQQHAGE 720
                      :|..:.:  .:.|..::||| ::.|.::.         :|:.:....||:||   
plant   638 ----------ILDFDPW--DESLTSQHNFA-KLLGQSDH---------RASTLESSNLLKQH--- 677

  Fly   721 NLFGGNMSKFFDFHKSQPQSHHQYLNGHPPQINGNGAVPEPQRVAASLESNRLNSPFVENGLINS 785
                 |....|.|.:.:..:...|                         .||..|       |..
plant   678 -----NDQSRFSFARHEESNSQAY-------------------------DNRSYS-------IYG 705

  Fly   786 QQQQQQQQQQQKQRMMGMYEFMPPNTQSQQNRFTQNSIVDDDLGFDPFVETQKGLAELMENEVVQ 850
            |..:.|..|:     .|....|..:....||.|..|.    ..|::.|. |..||:. .::.|.:
plant   706 QLSRDQPLQE-----FGANRDMYQDKLGSQNGFASNY----SGGYEQFA-TSPGLSS-YKSPVAR 759

  Fly   851 KQSINNENPLPKLPPQPQVPPHPQLVDNLQRARMPPPGFNHVNTLGLGGASRLQLTSKIIPFMNM 915
            .|        ...||....|           .|:|||||:......|  :|.:...::::...|:
plant   760 TQ--------VSAPPGFSAP-----------NRLPPPGFSSHQRGDL--SSDIASGTRLLDSANL 803

  Fly   916 PVNGVGNSGAQGQHQMPMGVNWNAPMGMHQNPGQPVGDSQLQHP----MAHNKVYNNSDWTSMDP 976
            ..|        ..|..|...|.||           .||.:...|    :...:::|..:....|.
plant   804 LRN--------AYHVPPPSGNLNA-----------AGDIEFIDPAILAVGRGRLHNGMETADFDL 849

  Fly   977 AILSFRQYSSFPQNQIPPHPQQQQDLFLQHLAQQQ--NSQSGGF------NNQAQQML-PMGMPN 1032
            ......|.:||           ..|..||.|||:.  ..|..||      ||.:.... |.|:  
plant   850 RSGFSSQLNSF-----------DNDARLQLLAQRSLAAQQVNGFHDPRNVNNFSSSFSDPYGI-- 901

  Fly  1033 SLLNGQQTQ----------PPQVNAN 1048
            |.....|||          |.|.:||
plant   902 SSRPTDQTQGTGLSPFTQLPRQASAN 927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cnot4NP_001260343.1 MOT2 5..>235 CDD:227502 100/236 (42%)
cwf18 312..>386 CDD:462423 18/73 (25%)
AT3G45630NP_190149.1 MOT2 6..411 CDD:227502 152/467 (33%)

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