DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh1 and LDHAL6B

DIOPT Version :10

Sequence 1:NP_609394.1 Gene:Mdh1 / 34414 FlyBaseID:FBgn0262782 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_149972.1 Gene:LDHAL6B / 92483 HGNCID:21481 Length:381 Species:Homo sapiens


Alignment Length:191 Identity:43/191 - (22%)
Similarity:73/191 - (38%) Gaps:16/191 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IRVVVTGAAGQ-IAYSLLYMIARGEVFGKDQPIVLHLLDIPPMVGVLEGVVMELA-DCALPLLVE 67
            :.::.||:.|. .|.|:|......|         |.|:|:..  ..|:|..|:|. ......:..
Human    72 VSIIGTGSVGMACAISILLKGLSDE---------LALVDLDE--DKLKGETMDLQHGSPFTKMPN 125

  Fly    68 VVPTTDPAVGFKDVSAAFLVGAMPRKEGMERKDLLSANVKIFRTQGQALDKFAKKDVKVLVVGNP 132
            :|.:.|..|...........||...| |..|.:|:..||.||:....::.::: ...|:::|.||
Human   126 IVCSKDYFVTANSNLVIITAGARQEK-GETRLNLVQRNVAIFKLMISSIVQYS-PHCKLIIVSNP 188

  Fly   133 ANTNALVCSSYAPSIPRENFSAMTRLDQNRATSQIAAKLGVPISAVKNIIIWGNHSSTQYP 193
            .:....|....:.........:...||..|....|..|||:...:....|: |.|..:..|
Human   189 VDILTYVAWKLSAFPKNRIIGSGCNLDTARFRFLIGQKLGIHSESCHGWIL-GEHGDSSVP 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh1NP_609394.1 MDH_cytoplasmic_cytosolic 3..327 CDD:133421 43/191 (23%)
LDHAL6BNP_149972.1 LDH_1 68..376 CDD:133429 43/191 (23%)

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