Protein Alignment Mdh1 and c-NAD-MDH2

DIOPT Version :9

• Sequence 1: NP_001285803.1
• Gene: Mdh1 / 34414
• FlyBaseID: FBgn0262782
• Length: 337
• Species: Drosophila melanogaster
• Sequence 2: NP_199147.1
• Gene: c-NAD-MDH2 / 834351
• AraportID: AT5G43330
• Length: 332
• Species: Arabidopsis thaliana
• Alignment Length: 328
• Identity: 183/328 - (55%)
• Similarity: 236/328 - (71%)
• Gaps: 0/328 - (0%)

  Fly     3 EPIRVVVTGAAGQIAYSLLYMIARGEVFGKDQPIVLHLLDIPPMVGVLEGVVMELADCALPLLVE 67
            ||:||:||||||||.|:|:.|||||.:.|.|||::||:||||.....|.||.|||.|.|.|||..
plant     4 EPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVDAAFPLLKG 68

  Fly    68 VVPTTDPAVGFKDVSAAFLVGAMPRKEGMERKDLLSANVKIFRTQGQALDKFAKKDVKVLVVGNP 132
            ||.|||.......|:.|.:||..||||||||||::|.||.|:::|..||:|.|..:.|||||.||
plant    69 VVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPNCKVLVVANP 133

  Fly   133 ANTNALVCSSYAPSIPRENFSAMTRLDQNRATSQIAAKLGVPISAVKNIIIWGNHSSTQYPDAGQ 197
            ||||||:...:|||||.:|.:.:||||.|||..|::.:|.||:|.|||:|||||||||||||...
plant   134 ANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVKNVIIWGNHSSTQYPDVNH 198

  Fly   198 AKVTANGTVKSVVDAINDNGYLQGSFVETVQKRGAAVIAARKMSSAMSAAKAACDHMHDWWNGTA 262
            |.|..:...|.|.:.:.::.:|.|.|:.|||:||||:|.|||:|||:|||.:||||:.||..||.
plant   199 ATVKTSVGEKPVRELVKNDEWLNGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVVGTP 263

  Fly   263 PGQFVSMGVFSDGSYDSPKDVIFSFPVEIKNKQWKIVSGLTLSDFAKTKLSVTGKELQEEKDEAL 327
            .|.||||||:|||||:.|..:|:||||..:|.:|.||.||.:.|.::.|:.:|.:||:||||.|.
plant   264 EGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEKDLAY 328

  Fly   328 SVL 330
            |.|
plant   329 SCL 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mdh1	NP_001285803.1	MDH_cytoplasmic_cytosolic	3..327	CDD:133421	180/323 (56%)
		MDH_euk_cyt	6..328	CDD:130819	179/321 (56%)
c-NAD-MDH2	NP_199147.1	MDH_cytoplasmic_cytosolic	4..328	CDD:133421	180/323 (56%)
		PLN00135	24..332	CDD:177744	169/308 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	202	1.000	Domainoid score	I860
eggNOG	1	0.900	-	-		E1_COG0039
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H4324
Inparanoid	1	1.050	381	1.000	Inparanoid score	I531
OMA	1	1.010	-	-		QHG53893
OrthoDB	1	1.010	-	-		D1118998at2759
OrthoFinder	1	1.000	-	-		FOG0004059
OrthoInspector	1	1.000	-	-		otm3518
orthoMCL	1	0.900	-	-		OOG6_101066
Panther	1	1.100	-	-	LDO	PTHR23382
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X2809
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	15	14.840