DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh1 and Mdh2

DIOPT Version :10

Sequence 1:NP_609394.1 Gene:Mdh1 / 34414 FlyBaseID:FBgn0262782 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_032643.2 Gene:Mdh2 / 17448 MGIID:97050 Length:338 Species:Mus musculus


Alignment Length:281 Identity:70/281 - (24%)
Similarity:105/281 - (37%) Gaps:86/281 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RVVVTGAAGQIAYSLLYMIARGEVFGKDQPIV--LHLLDIPPMVGV------------LEGVV-- 54
            :|.|.||:|.|...|..::       |:.|:|  |.|.||....||            ::|.:  
Mouse    26 KVAVLGASGGIGQPLSLLL-------KNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGP 83

  Fly    55 MELADCALPLLVEVVPTTDPAVGFKDVSAAFLVGAMPRKEGMERKDLLSANVKIFRTQGQALDKF 119
            .:|.||.....|.|:|                 ..:|||.||.|.||.:.|..|..|...|..:.
Mouse    84 EQLPDCLKGCDVVVIP-----------------AGVPRKPGMTRDDLFNTNATIVATLTAACAQH 131

  Fly   120 AKKDVKVLVVGNPANT----NALVCSSYAPSIPRENFSAMTRLDQNRATSQIAAKLGVPISAVKN 180
            . .:..|.::.||.|:    .|.|...:....|.:.| .:|.||..||.:.:|...|:..:.|..
Mouse   132 C-PEAMVCIIANPVNSTIPITAEVFKKHGVYNPNKIF-GVTTLDIVRANTFVAELKGLDPARVNV 194

  Fly   181 IIIWGNHSSTQYP------------------------DAG----QAKVTANGT-----------V 206
            .:|.|:...|..|                        :||    :||..|...           |
Mouse   195 PVIGGHAGKTIIPLISQCTPKVDFPQDQLATLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFV 259

  Fly   207 KSVVDAIN-DNGYLQGSFVET 226
            .|:|||:| ..|.::.|||::
Mouse   260 FSLVDAMNGKEGVVECSFVQS 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh1NP_609394.1 MDH_cytoplasmic_cytosolic 3..327 CDD:133421 70/281 (25%)
Mdh2NP_032643.2 MDH_glyoxysomal_mitochondrial 26..334 CDD:133422 70/281 (25%)

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