DRSC/TRiP Functional Genomics Resources

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Protein Alignment da and TCF3

DIOPT Version :9

Sequence 1:NP_001356956.1 Gene:da / 34413 FlyBaseID:FBgn0267821 Length:775 Species:Drosophila melanogaster
Sequence 2:XP_024307437.1 Gene:TCF3 / 6929 HGNCID:11633 Length:710 Species:Homo sapiens


Alignment Length:768 Identity:224/768 - (29%)
Similarity:295/768 - (38%) Gaps:226/768 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QPTGTVGADRGGGGGYHSP-YGSLGVENGMYPSDFNSMHDTVNGGNNRYANASTVDQYFDSAAAG 89
            :|....||..||.|....| .||.| ......|.|:.......|.:...:::|.....|  ...|
Human    36 RPASLAGAQFGGSGLEDRPSSGSWG-SGDQSSSSFDPSRTFSEGTHFTESHSSLSSSTF--LGPG 97

  Fly    90 SGG---AWCQPQ-----------MSSANSYMGQS----AYQNSGPLSGHSIDQQQQQVHQADGLG 136
            .||   |||.|.           |.||.:..|:|    ||.:.|..:|            ..||.
Human    98 LGGECLAWCGPSAVHRCADVGLGMVSARTAPGKSGERGAYASFGRDAG------------VGGLT 150

  Fly   137 MGG--GGGGGVGADGMHCPVTTGLPPISSFRPTSGGI----GGPGAGQQAPVNVNVNPPAVFNS- 194
            ..|  .|...:.:.|...|  :|:...|.:.|:..|.    ...|:....|..|...||.:.:| 
Human   151 QAGFLSGELALNSPGPLSP--SGMKGTSQYYPSYSGSSRRRAADGSLDTQPKKVRKVPPGLPSSV 213

  Fly   195 ----------------PQAHNHNHTVQAQ--------HSALSTAGPLGHHSLNHTPHAHSHTLPL 235
                            |.|...:.|..|.        |.:.....|.|...........|..|||
Human   214 YPPSSGEDYGRDATAYPSAKTPSSTYPAPFYVADGSLHPSAELWSPPGQAGFGPMLGGGSSPLPL 278

  Fly   236 PHAL-PHGHTLP-------HPH-------HSQQNSPAVQSSDAFSGA-GASV--------KVAGA 276
            |... |.|.:..       |.|       |..:.:..:.|:.:||.| ||:.        .|:||
Human   279 PPGSGPVGSSGSSSTFGGLHQHERMGYQLHGAEVNGGLPSASSFSSAPGATYGGVSSHTPPVSGA 343

  Fly   277 ----------GNSSAAALRQ---QMYMPADQSISSFGSNPSTPVNSPPPLTQSVVGGGGEPSVSG 328
                      ..||..||.:   .:|.| |.|.::|.|:|||||.||..|             :|
Human   344 DSLLGSRGTTAGSSGDALGKALASIYSP-DHSSNNFSSSPSTPVGSPQGL-------------AG 394

  Fly   329 GSGWGHSVLNGGPSSSYASEMVPVSSLHTMASVFQGVRMEERLDDALNVLRNHC----------- 382
            .|.|..:...|..|.||.      ..||.:.|     ::|:.||:|::|||:|.           
Human   395 TSQWPRAGAPGALSPSYD------GGLHGLQS-----KIEDHLDEAIHVLRSHAVGTAGDMHTLL 448

  Fly   383 -----------EPEMLAGVNQSLASID-------NIDALTSFVPNSPSHLGSGGNSGSVSNTSNA 429
                       .|..|.|.:..|.|..       ..|......|.|| .|..||:........:.
Human   449 PGHGALASGFTGPMSLGGRHAGLVSAGRGWSWAVGGDPAPPDAPVSP-RLQVGGSHPEDGLAGST 512

  Fly   430 ALVHEVLALGAAAAAGT---------SGQSVGGAGSLASLKLDRSASTSLPKQTKKRKEHTAISN 485
            :|:|...||  .:..||         |...:|.||:.|       |::.:.::.|:.:|:|:.::
Human   513 SLMHNHAAL--PSQPGTLPDLSRPPDSYSGLGRAGATA-------AASEIKREEKEDEENTSAAD 568

  Fly   486 SVPAGVSTTSSLTSLDISDTKPTSSIESSNSGLQQHS--QGKGTKRPR-RYCSSADEDDDAEPAV 547
                                               ||  :.|..|.|| |.....||||...|..
Human   569 -----------------------------------HSEEEKKELKAPRARTSPDEDEDDLLPPEQ 598

  Fly   548 KAIREKERRQANNARERIRIRDINEALKELGRMCMTHLKSDKPQTKLGILNMAVEVIMTLEQQVR 612
            ||.||||||.|||||||:|:||||||.|||||||..||.|:||||||.||:.||.||:.||||||
Human   599 KAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQTKLLILHQAVSVILNLEQQVR 663

  Fly   613 ERNLNPKAACLKRREEEKAEDGPKLSAQHHMIPQPQQV--GGTPGSSYHSQPA 663
            ||||||||||||||||||...         ::..||.|  ...||.|....||
Human   664 ERNLNPKAACLKRREEEKVSG---------VVGDPQMVLSAPHPGLSEAHNPA 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daNP_001356956.1 HLH 560..613 CDD:197674 39/52 (75%)
TCF3XP_024307437.1 Paf1 <552..606 CDD:309201 20/88 (23%)
HLH 611..664 CDD:197674 39/52 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149769
Domainoid 1 1.000 86 1.000 Domainoid score I8084
eggNOG 1 0.900 - - E1_KOG3910
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I3669
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D260626at33208
OrthoFinder 1 1.000 - - FOG0001459
OrthoInspector 1 1.000 - - otm40698
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11793
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4532
SonicParanoid 1 1.000 - - X1175
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.980

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