DRSC/TRiP Functional Genomics Resources

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Protein Alignment da and Ascl2

DIOPT Version :9

Sequence 1:NP_001356956.1 Gene:da / 34413 FlyBaseID:FBgn0267821 Length:775 Species:Drosophila melanogaster
Sequence 2:NP_113691.1 Gene:Ascl2 / 24209 RGDID:2159 Length:260 Species:Rattus norvegicus


Alignment Length:234 Identity:51/234 - (21%)
Similarity:88/234 - (37%) Gaps:58/234 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   465 SASTSLPKQTKKR----------KEHTAISNSVPAGVSTTSSLTSLDISDTKPTSSIESSNSGLQ 519
            |.|::||:..:..          :||  .|...|..|:...:|.: .:.|......:..::||:.
  Rat    24 SCSSALPEAREGANVHFPPHPVPREH--FSCGAPKPVAGAPALNA-SLMDGGALPRLVPTSSGVA 85

  Fly   520 QHSQGKGTKRP---------RRYCSSADEDDDAEPAVKAIREKERRQANNARERIRIRDINEALK 575
            .....:  :||         ||..|.|.|...:..||      .||   |.|||.|::.:|...:
  Rat    86 GACTAR--RRPPSPELLRCSRRRRSGATEASSSSAAV------ARR---NERERNRVKLVNLGFQ 139

  Fly   576 ELGRMCMTHLKSDKPQTKLGILNMAVEVIMTLEQQVRERN--------------LNPKAACLKRR 626
            .| |..:.|..::|..:|:..|..|||.|..|::.:.|.:              ..|...|    
  Rat   140 AL-RQHVPHGGANKKLSKVETLRSAVEYIRALQRLLAEHDAVRAALSGGLLTPATRPSDVC---- 199

  Fly   627 EEEKAEDGPKLSAQHHMIPQPQQVG----GTPGSSYHSQ 661
              .:....|..::.......|.::|    .:|.|:|.|:
  Rat   200 --TQPSASPASASLSCTSTSPDRLGCSEPASPRSAYSSE 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daNP_001356956.1 HLH 560..613 CDD:197674 17/52 (33%)
Ascl2NP_113691.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..126 12/51 (24%)
HLH 134..176 CDD:197674 12/42 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..239 9/52 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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