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Protein Alignment da and ngn-1
DIOPT Version :9
Sequence 1: | NP_001356956.1 |
Gene: | da / 34413 |
FlyBaseID: | FBgn0267821 |
Length: | 775 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_500236.1 |
Gene: | ngn-1 / 177045 |
WormBaseID: | WBGene00003595 |
Length: | 184 |
Species: | Caenorhabditis elegans |
Alignment Length: | 169 |
Identity: | 47/169 - (27%) |
Similarity: | 68/169 - (40%) |
Gaps: | 33/169 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 511 IESSNSGLQQHSQGKGTKRP-----RRY-CSSADEDDDAEPAVKAIREKERRQANNARERIRIRD 569
:|..|. :.|:|: ..|::| ||| |.. ..||.....:..||...|||||.|:..
Worm 21 MEREND-MDQNSK-NSTQKPVKREKRRYRCRK------RSPATIERAKTVRRDKANARERRRMNS 77
Fly 570 INEALKELGRMCMTHLKSDKPQTKLGILNMAVEVIMTLEQQVRERNLNPKAACLKRREEEKAEDG 634
:|:||:.| |..:..|..:...||:..|..|.|.|.:|..|:...:.:....| |....|
Worm 78 LNDALEHL-RGILPALPDEPKMTKIETLRKAQEYIASLSFQLSGGSPDSSQCC------ETGSCG 135
Fly 635 --------PKLSAQHHMIPQPQQVGGTPGSSYHSQPAQL 665
.....|....|||.|. .|||.:.|:|:
Worm 136 LCSASQSLQSTPFQSPCFPQPLQY----PSSYSNPPSQM 170
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
da | NP_001356956.1 |
HLH |
560..613 |
CDD:197674 |
20/52 (38%) |
ngn-1 | NP_500236.1 |
bHLH_SF |
63..119 |
CDD:381792 |
22/56 (39%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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