DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS7 and RPS5

DIOPT Version :9

Sequence 1:NP_001260339.1 Gene:mRpS7 / 34412 FlyBaseID:FBgn0032236 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_012657.1 Gene:RPS5 / 853587 SGDID:S000003884 Length:225 Species:Saccharomyces cerevisiae


Alignment Length:194 Identity:47/194 - (24%)
Similarity:81/194 - (41%) Gaps:34/194 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 YKQLEQKNDLSKLYHVPIKAAV--------------NKSSDTIFHDDTKHKMINYITKKGNSALA 85
            ::::|.| |.|.:.:|.::..:              .|:...|....|...|:|. ...|....|
Yeast    48 FEEVEVK-DASLVDYVQVRQPIFVAHTAGRYANKRFRKAQCPIIERLTNSLMMNG-RNNGKKLKA 110

  Fly    86 RTLLSKTLELIKRTQTEHMNLAKGEKTTINTNPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVP 150
            ..::..||::|              ....:.||..::..|:.|..|....|.:..||...:..|.
Yeast   111 VRIIKHTLDII--------------NVLTDQNPIQVVVDAITNTGPREDTTRVGGGGAARRQAVD 161

  Fly   151 ITTKRSYFLAMKWLLEAAREKE-RKV-SLPEKLAWEILDAAHGQGR--VIKRKDDLHRLCESNR 210
            ::..|....|:..|...|||.. |.: ::.|.||.|:::||.|...  .||:||:|.|:.:|||
Yeast   162 VSPLRRVNQAIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDELERVAKSNR 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS7NP_001260339.1 uS7_Mitochondria_Mammalian 21..216 CDD:271249 47/194 (24%)
RPS5NP_012657.1 uS7_Eukaryote 41..225 CDD:271246 45/192 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0049
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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