DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS7 and RPS5A

DIOPT Version :10

Sequence 1:NP_523537.1 Gene:mRpS7 / 34412 FlyBaseID:FBgn0032236 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_187800.1 Gene:RPS5A / 820367 AraportID:AT3G11940 Length:207 Species:Arabidopsis thaliana


Alignment Length:190 Identity:43/190 - (22%)
Similarity:82/190 - (43%) Gaps:38/190 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DLSKLYHVPIKAAVNKSSDTIFHDDTKHK----------MINYIT--------KKGNSALARTLL 89
            |:|.:.::.::||  |.:..:.|...::.          ::..:|        ..|...:|..::
plant    34 DISLVDYIGVQAA--KHATFVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 96

  Fly    90 SKTLELIKRTQTEHMNLAKGEKTTINTNPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTK 154
            ...:|:|      |:        ..:.||..::..|:.|..|....|.|...||..:..|.|:..
plant    97 KHAMEII------HL--------LSDLNPIQVIIDAIVNSGPREDATRIGSAGVVRRQAVDISPL 147

  Fly   155 RSYFLAMKWLLEAAREKE-RKV-SLPEKLAWEILDAAHGQGR--VIKRKDDLHRLCESNR 210
            |....|:..:...|||.. |.: ::.|.||.|:::||.|...  .||:||::.|:.::||
plant   148 RRVNQAIFLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS7NP_523537.1 uS7_Mitochondria_Mammalian 21..216 CDD:271249 43/190 (23%)
RPS5ANP_187800.1 uS7_Eukaryote 20..207 CDD:271246 41/188 (22%)

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