DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS7 and RpS5a

DIOPT Version :9

Sequence 1:NP_001260339.1 Gene:mRpS7 / 34412 FlyBaseID:FBgn0032236 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001285360.1 Gene:RpS5a / 32700 FlyBaseID:FBgn0002590 Length:228 Species:Drosophila melanogaster


Alignment Length:190 Identity:53/190 - (27%)
Similarity:81/190 - (42%) Gaps:37/190 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NDLSKLYHVPIKAAVNKSSDTIFHDDTKHKMINYITKKGNSA-------LARTLLSK-------- 91
            ||:|...::.:|..        |.....|....|..|:...|       |..:|:.|        
  Fly    55 NDISLQDYISVKEK--------FARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKL 111

  Fly    92 -TLELIKRTQTEHMNLAKGEKTTINTNPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTKR 155
             ...::|.: .|.::|..||      ||..:|..|:.|..|....|.|.|.|...:..|.::..|
  Fly   112 MACRIVKHS-FEIIHLLTGE------NPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 169

  Fly   156 SYFLAMKWLL-EAAREKE-RKV-SLPEKLAWEILDAAHGQGR--VIKRKDDLHRLCESNR 210
            ....|: ||| ..|||.. |.: ::.|.||.|:::||.|...  .||:||:|.|:.:|||
  Fly   170 RVNQAI-WLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS7NP_001260339.1 uS7_Mitochondria_Mammalian 21..216 CDD:271249 53/190 (28%)
RpS5aNP_001285360.1 uS7_Eukaryote 42..228 CDD:271246 51/188 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443091
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0049
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11205
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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