DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk1 and Cdk4

DIOPT Version :10

Sequence 1:NP_476797.1 Gene:Cdk1 / 34411 FlyBaseID:FBgn0004106 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_446045.1 Gene:Cdk4 / 94201 RGDID:621120 Length:303 Species:Rattus norvegicus


Alignment Length:300 Identity:118/300 - (39%)
Similarity:182/300 - (60%) Gaps:16/300 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FEKIEKIGEGTYGVVYKGRNRLTGQIVAMKKIRLESDDE---GVPSTAIREISLLKEL---KHEN 62
            :|.:.:||.|.||.|||.|:..:|..||:|.:|:.:...   |:|.:.:||::||:.|   :|.|
  Rat     6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGAAGGGLPVSTVREVALLRRLEAFEHPN 70

  Fly    63 IVCLEDVLM-----EENRIYLIFEFLSMDLKKYMDSLPVDKHMESELVRSYLYQITSAILFCHRR 122
            :|.|.||..     .:.::.|:||.:..||:.|:|..| ...:..|.::..:.|..|.:.|.|..
  Rat    71 VVRLMDVCATSRTDRDIKVTLVFEHIDQDLRTYLDKAP-PPGLPVETIKDLMRQFLSGLDFLHAN 134

  Fly   123 RVLHRDLKPQNLLIDKSGLIKVADFGLGRSFGIPVRIYTHEIVTLWYRAPEVLLGSPRYSCPVDI 187
            .::||||||:|:|:..:|.:|:|||||.|.:...:.: |..:||||||||||||.| .|:.|||:
  Rat   135 CIVHRDLKPENILVTSNGTVKLADFGLARIYSYQMAL-TPVVVTLWYRAPEVLLQS-TYATPVDM 197

  Fly   188 WSIGCIFAEMATRKPLFQGDSEIDQLFRMFRILKTPTEDIWPGVTSLPDYKNTFPCWSTNQLTNQ 252
            ||:|||||||..|||||.|:||.|||.::|.::..|.||.||...|||  :..|.......:.:.
  Rat   198 WSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPREVSLP--RGAFSPRGPRPVQSV 260

  Fly   253 LKNLDANGIDLIQKMLIYDPVHRISAKDILEHPYFNGFQS 292
            :..::.:|..|:.:||.::|:.||||...|:|.|.:..:|
  Rat   261 VPEMEESGAQLLLEMLTFNPLKRISAFRALQHSYLHKEES 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk1NP_476797.1 STKc_CDK1_euk 3..287 CDD:270845 116/293 (40%)
Cdk4NP_446045.1 Protein Kinases, catalytic domain 5..295 CDD:473864 116/293 (40%)
Required for binding D-type cyclins. /evidence=ECO:0000250 50..56 1/5 (20%)

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