DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk1 and cdk4

DIOPT Version :9

Sequence 1:NP_476797.1 Gene:Cdk1 / 34411 FlyBaseID:FBgn0004106 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001071245.1 Gene:cdk4 / 777730 ZFINID:ZDB-GENE-060929-974 Length:297 Species:Danio rerio


Alignment Length:298 Identity:131/298 - (43%)
Similarity:191/298 - (64%) Gaps:23/298 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FEKIEKIGEGTYGVVYKGRNRLTGQIVAMKKIRLESDDEGVPSTAIREISLLKELK---HENIVC 65
            :|.:.:||.|.||.|||.|:|.:||.||:|.:|::::.:|:|.:.:||::|||.|:   |.|||.
Zfish     9 YEPVAEIGGGAYGTVYKARDRDSGQFVALKSVRVQTNQDGLPLSTVREVALLKRLEQFDHPNIVR 73

  Fly    66 LEDVLM-----EENRIYLIFEFLSMDLKKYMD-----SLPVDKHMESELVRSYLYQITSAILFCH 120
            |.||..     :|.::.|:||.:..||:.|::     .|||||      :|..:.|:...:.|.|
Zfish    74 LMDVCATLRTDQETKVTLVFEHVDQDLRAYLEKVPAPGLPVDK------IRDLMQQLLCGLAFLH 132

  Fly   121 RRRVLHRDLKPQNLLIDKSGLIKVADFGLGRSFGIPVRIYTHEIVTLWYRAPEVLLGSPRYSCPV 185
            ..|||||||||:|:|:...|.:|:|||||.|.:...:.: |..:||||||:|||||.| .|:.||
Zfish   133 TNRVLHRDLKPENILVTSRGQVKLADFGLARIYSCHMAL-TPVVVTLWYRSPEVLLQS-TYATPV 195

  Fly   186 DIWSIGCIFAEMATRKPLFQGDSEIDQLFRMFRILKTPTEDIWPGVTSLPDYKNTFPCWSTNQLT 250
            ||||.|||||||..|||||.||||.|||.::|.::..|.||.||...:|..:  .|...|...:|
Zfish   196 DIWSTGCIFAEMFRRKPLFCGDSEADQLGKIFAVIGLPAEDQWPTDVTLSHH--NFSPQSPRPIT 258

  Fly   251 NQLKNLDANGIDLIQKMLIYDPVHRISAKDILEHPYFN 288
            :.:.::...|.:|:.|||.:||:.||||.:.|:||:|:
Zfish   259 DCVPDITEKGAELLLKMLTFDPLKRISALNALDHPFFS 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk1NP_476797.1 STKc_CDK1_euk 3..287 CDD:270845 130/295 (44%)
cdk4NP_001071245.1 STKc_CDK4 8..295 CDD:143368 130/295 (44%)
S_TKc 9..295 CDD:214567 130/295 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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