DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk1 and cdk18

DIOPT Version :9

Sequence 1:NP_476797.1 Gene:Cdk1 / 34411 FlyBaseID:FBgn0004106 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001006837.1 Gene:cdk18 / 448581 XenbaseID:XB-GENE-489094 Length:462 Species:Xenopus tropicalis


Alignment Length:288 Identity:143/288 - (49%)
Similarity:205/288 - (71%) Gaps:4/288 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDFEKIEKIGEGTYGVVYKGRNRLTGQIVAMKKIRLESDDEGVPSTAIREISLLKELKHENIVC 65
            :|.:.|::|:|||||..|:|||::|||.:||:|:|||| .:||.|.|||||:||||.|||.|||.
 Frog   129 LETYIKLDKLGEGTYATVFKGRSKLTGNLVALKEIRLE-HEEGAPCTAIREVSLLKNLKHSNIVT 192

  Fly    66 LEDVLMEENRIYLIFEFLSMDLKKYMDSLPVDKHMESELVRSYLYQITSAILFCHRRRVLHRDLK 130
            |.|::..|..:.|:||:|..|||:|:|:  ....|....|:.:::|:...:.:||||::||||||
 Frog   193 LHDIIHTEYCLTLVFEYLDSDLKQYLDN--CGNLMCMHNVKIFMFQLLRGLSYCHRRKILHRDLK 255

  Fly   131 PQNLLIDKSGLIKVADFGLGRSFGIPVRIYTHEIVTLWYRAPEVLLGSPRYSCPVDIWSIGCIFA 195
            ||||||::.|.:|:|||||.|:..:|.:.|::|:||||||.|:|||||..||.|:|:|.:|||..
 Frog   256 PQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILY 320

  Fly   196 EMATRKPLFQGDSEIDQLFRMFRILKTPTEDIWPGVTSLPDYKN-TFPCWSTNQLTNQLKNLDAN 259
            ||||.:|:|.|.:..::|..:||:|.||||:.|||:.|..::|. .||.:.|..|.|....||::
 Frog   321 EMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGICSNKEFKGYGFPQYRTQPLKNHTPRLDSD 385

  Fly   260 GIDLIQKMLIYDPVHRISAKDILEHPYF 287
            ||||:..:|:|:...||||...|.|.||
 Frog   386 GIDLLSSLLLYEDKKRISADMGLRHAYF 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk1NP_476797.1 STKc_CDK1_euk 3..287 CDD:270845 140/284 (49%)
cdk18NP_001006837.1 STKc_PCTAIRE3 126..413 CDD:270853 141/286 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1010560at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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