DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk1 and Cdk5

DIOPT Version :10

Sequence 1:NP_476797.1 Gene:Cdk1 / 34411 FlyBaseID:FBgn0004106 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_031694.1 Gene:Cdk5 / 12568 MGIID:101765 Length:292 Species:Mus musculus


Alignment Length:292 Identity:166/292 - (56%)
Similarity:222/292 - (76%) Gaps:5/292 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDFEKIEKIGEGTYGVVYKGRNRLTGQIVAMKKIRLESDDEGVPSTAIREISLLKELKHENIVC 65
            |:.:||:|||||||||.|:|.:||.|.:|||:|::||:.|||||||:|:|||.|||||||:|||.
Mouse     1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65

  Fly    66 LEDVLMEENRIYLIFEFLSMDLKKYMDSLPVDKHMESELVRSYLYQITSAILFCHRRRVLHRDLK 130
            |.|||..:.::.|:|||...|||||.||...|  ::.|:|:|:|:|:...:.|||.|.|||||||
Mouse    66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLK 128

  Fly   131 PQNLLIDKSGLIKVADFGLGRSFGIPVRIYTHEIVTLWYRAPEVLLGSPRYSCPVDIWSIGCIFA 195
            ||||||:::|.:|:|||||.|:||||||.|:.|:||||||.|:||.|:..||..:|:||.|||||
Mouse   129 PQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193

  Fly   196 EMATR-KPLFQGDSEIDQLFRMFRILKTPTEDIWPGVTSLPDYKNTFPCW-STNQLTNQLKNLDA 258
            |:|.. :|||.|:...|||.|:||:|.||||:.||.:|.||||| .:|.: :|..|.|.:..|:|
Mouse   194 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYK-PYPMYPATTSLVNVVPKLNA 257

  Fly   259 NGIDLIQKMLIYDPVHRISAKDILEHPYFNGF 290
            .|.||:|.:|..:||.||||::.|:||||:.|
Mouse   258 TGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk1NP_476797.1 STKc_CDK1_euk 3..287 CDD:270845 162/285 (57%)
Cdk5NP_031694.1 STKc_CDK5 3..286 CDD:143344 162/285 (57%)

Return to query results.
Submit another query.