DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk1 and Cdk4

DIOPT Version :9

Sequence 1:NP_476797.1 Gene:Cdk1 / 34411 FlyBaseID:FBgn0004106 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_034000.1 Gene:Cdk4 / 12567 MGIID:88357 Length:303 Species:Mus musculus


Alignment Length:300 Identity:118/300 - (39%)
Similarity:181/300 - (60%) Gaps:16/300 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FEKIEKIGEGTYGVVYKGRNRLTGQIVAMKKIRLESDDE---GVPSTAIREISLLKEL---KHEN 62
            :|.:.:||.|.||.|||.|:..:|..||:|.:|:.:...   |:|.:.:||::||:.|   :|.|
Mouse     6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGAAGGGLPVSTVREVALLRRLEAFEHPN 70

  Fly    63 IVCLEDVLM-----EENRIYLIFEFLSMDLKKYMDSLPVDKHMESELVRSYLYQITSAILFCHRR 122
            :|.|.||..     .:.::.|:||.:..||:.|:|..| ...:..|.::..:.|..|.:.|.|..
Mouse    71 VVRLMDVCATSRTDRDIKVTLVFEHIDQDLRTYLDKAP-PPGLPVETIKDLMRQFLSGLDFLHAN 134

  Fly   123 RVLHRDLKPQNLLIDKSGLIKVADFGLGRSFGIPVRIYTHEIVTLWYRAPEVLLGSPRYSCPVDI 187
            .::||||||:|:|:..:|.:|:|||||.|.:...:.: |..:||||||||||||.| .|:.|||:
Mouse   135 CIVHRDLKPENILVTSNGTVKLADFGLARIYSYQMAL-TPVVVTLWYRAPEVLLQS-TYATPVDM 197

  Fly   188 WSIGCIFAEMATRKPLFQGDSEIDQLFRMFRILKTPTEDIWPGVTSLPDYKNTFPCWSTNQLTNQ 252
            ||:|||||||..|||||.|:||.|||.::|.::..|.||.||...|||  :..|.......:.:.
Mouse   198 WSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPREVSLP--RGAFAPRGPRPVQSV 260

  Fly   253 LKNLDANGIDLIQKMLIYDPVHRISAKDILEHPYFNGFQS 292
            :..::.:|..|:.:||.::|..||||...|:|.|.:..:|
Mouse   261 VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKEES 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk1NP_476797.1 STKc_CDK1_euk 3..287 CDD:270845 116/293 (40%)
Cdk4NP_034000.1 STKc_CDK4 5..295 CDD:143368 116/293 (40%)
Required for binding D-type cyclins. /evidence=ECO:0000250 50..56 1/5 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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