Sequence 1: | NP_723576.1 | Gene: | CG5096 / 34410 | FlyBaseID: | FBgn0032235 | Length: | 491 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112611.1 | Gene: | Slit3 / 83467 | RGDID: | 69311 | Length: | 1523 | Species: | Rattus norvegicus |
Alignment Length: | 435 | Identity: | 97/435 - (22%) |
---|---|---|---|
Similarity: | 164/435 - (37%) | Gaps: | 113/435 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 87 INLEHNNLTSVPILPKYDVEN---LYLANNQIDSISVGAFQNLTELVTLDLSHNRL--------- 139
Fly 140 -TSKVLVPDV------------FKGPFTVQD---------------FESLENLKTLNLGYNDLHS 176
Fly 177 LDADLFEHIPHIEELVLCSNSFH-------VIDQLSETAISG----------LQSLKILDVSYME 224
Fly 225 IDDLPDTILHGPRDLEIFIAAGNLFNQLPKALKYATN-------------------LTSLVLNEN 270
Fly 271 PIENLIGDNVFPPLTKLTHLSMTFMSKLYKIGPGAFSELQSLTELILSDNK-------------- 321
Fly 322 ----LLNEIDEEALSKNVTGGQYLDYPPLEKVYLNNCNVSTLPKELLVRWDKLKALDLRFNPWNC 382
Fly 383 DESNDFLINVLIDRINKTTPVLAKDVKCGGPNKLNDVTLLRVANE 427 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5096 | NP_723576.1 | LRR_RI | 69..378 | CDD:238064 | 86/384 (22%) |
leucine-rich repeat | 85..104 | CDD:275380 | 4/16 (25%) | ||
LRR_8 | 105..174 | CDD:290566 | 28/108 (26%) | ||
leucine-rich repeat | 105..128 | CDD:275380 | 11/25 (44%) | ||
leucine-rich repeat | 129..163 | CDD:275380 | 13/70 (19%) | ||
LRR_8 | 163..222 | CDD:290566 | 18/75 (24%) | ||
leucine-rich repeat | 164..187 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 188..214 | CDD:275380 | 9/42 (21%) | ||
leucine-rich repeat | 215..238 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 239..261 | CDD:275380 | 4/21 (19%) | ||
LRR_8 | 260..322 | CDD:290566 | 20/98 (20%) | ||
leucine-rich repeat | 262..286 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 287..311 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 346..369 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 370..388 | CDD:275380 | 6/17 (35%) | ||
Slit3 | NP_112611.1 | leucine-rich repeat | 311..332 | CDD:275380 | 5/21 (24%) |
LRR_4 | 331..371 | CDD:289563 | 14/40 (35%) | ||
LRR 8 | 332..353 | 6/21 (29%) | |||
leucine-rich repeat | 333..356 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 355..439 | CDD:290566 | 21/87 (24%) | ||
LRR 9 | 356..377 | 7/20 (35%) | |||
leucine-rich repeat | 357..377 | CDD:275380 | 6/19 (32%) | ||
LRR 10 | 380..401 | 5/24 (21%) | |||
leucine-rich repeat | 381..404 | CDD:275380 | 6/26 (23%) | ||
LRR 11 | 404..425 | 5/20 (25%) | |||
leucine-rich repeat | 405..426 | CDD:275380 | 5/20 (25%) | ||
TPKR_C2 | 437..>467 | CDD:301599 | 9/34 (26%) | ||
LRRNT | 505..535 | CDD:214470 | |||
LRR 12 | 533..554 | ||||
leucine-rich repeat | 534..558 | CDD:275380 | |||
LRR_4 | 535..574 | CDD:289563 | |||
LRR_8 | 557..617 | CDD:290566 | |||
LRR 13 | 558..579 | ||||
leucine-rich repeat | 559..582 | CDD:275380 | |||
LRR 14 | 582..603 | ||||
leucine-rich repeat | 583..606 | CDD:275380 | |||
LRR_8 | 605..665 | CDD:290566 | |||
LRR 15 | 606..627 | ||||
leucine-rich repeat | 607..630 | CDD:275380 | |||
LRR 16 | 630..651 | ||||
leucine-rich repeat | 631..654 | CDD:275380 | |||
leucine-rich repeat | 655..745 | CDD:275380 | |||
LRRCT | 663..711 | CDD:214507 | |||
LRRNT | 725..756 | CDD:214470 | |||
LRR_RI | <741..869 | CDD:238064 | |||
leucine-rich repeat | 746..776 | CDD:275380 | |||
LRR 17 | 753..774 | ||||
LRR_8 | 775..835 | CDD:290566 | |||
LRR 18 | 776..797 | ||||
leucine-rich repeat | 777..800 | CDD:275380 | |||
LRR 19 | 800..821 | ||||
leucine-rich repeat | 801..824 | CDD:275380 | |||
LRR 20 | 824..845 | ||||
leucine-rich repeat | 825..846 | CDD:275380 | |||
LRRCT | 857..906 | CDD:214507 | |||
EGF_CA | 956..994 | CDD:238011 | |||
EGF_CA | 998..1031 | CDD:238011 | |||
EGF_CA | 1035..1072 | CDD:238011 | |||
EGF_CA | 1074..1110 | CDD:238011 | |||
EGF | 1123..1153 | CDD:278437 | |||
Laminin_G_2 | 1188..1314 | CDD:280389 | |||
EGF_CA | 1370..1402 | CDD:238011 | |||
GHB_like | 1463..1519 | CDD:304424 | |||
LRRNT | 33..60 | CDD:279764 | |||
LRR_RI | <49..220 | CDD:238064 | 40/153 (26%) | ||
LRR_8 | 61..121 | CDD:290566 | 19/54 (35%) | ||
LRR 1 | 62..83 | 4/16 (25%) | |||
leucine-rich repeat | 64..86 | CDD:275380 | 4/19 (21%) | ||
LRR 2 | 86..107 | 9/20 (45%) | |||
leucine-rich repeat | 87..110 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 109..169 | CDD:290566 | 11/59 (19%) | ||
LRR 3 | 110..131 | 5/20 (25%) | |||
leucine-rich repeat | 111..134 | CDD:275380 | 6/22 (27%) | ||
LRR 4 | 134..155 | 3/20 (15%) | |||
leucine-rich repeat | 135..158 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 157..217 | CDD:290566 | 15/59 (25%) | ||
LRR 5 | 158..179 | 2/20 (10%) | |||
leucine-rich repeat | 159..182 | CDD:275380 | 3/22 (14%) | ||
LRR 6 | 182..203 | 5/20 (25%) | |||
leucine-rich repeat | 183..206 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 207..309 | CDD:275380 | 19/109 (17%) | ||
LRRNT | 280..311 | CDD:214470 | 3/30 (10%) | ||
LRR_RI | <295..457 | CDD:238064 | 39/172 (23%) | ||
LRR 7 | 308..329 | 5/21 (24%) | |||
LRR_8 | 311..367 | CDD:290566 | 18/57 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |