DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5096 and LRRC4

DIOPT Version :9

Sequence 1:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_071426.1 Gene:LRRC4 / 64101 HGNCID:15586 Length:653 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5096NP_723576.1 LRR_RI 69..378 CDD:238064
leucine-rich repeat 85..104 CDD:275380
LRR_8 105..174 CDD:290566
leucine-rich repeat 105..128 CDD:275380
leucine-rich repeat 129..163 CDD:275380
LRR_8 163..222 CDD:290566
leucine-rich repeat 164..187 CDD:275380
leucine-rich repeat 188..214 CDD:275380
leucine-rich repeat 215..238 CDD:275380
leucine-rich repeat 239..261 CDD:275380
LRR_8 260..322 CDD:290566
leucine-rich repeat 262..286 CDD:275380
leucine-rich repeat 287..311 CDD:275380
leucine-rich repeat 346..369 CDD:275380
leucine-rich repeat 370..388 CDD:275380
LRRC4NP_071426.1 LRRNT 46..79 CDD:214470
LRR <74..291 CDD:227223
LRR 1 76..97
leucine-rich repeat 77..100 CDD:275380
LRR 2 100..121
leucine-rich repeat 101..124 CDD:275380
LRR 3 124..145
leucine-rich repeat 125..148 CDD:275380
LRR 4 148..169
leucine-rich repeat 149..172 CDD:275380
LRR 5 172..194
leucine-rich repeat 173..197 CDD:275380
LRR 6 197..218
leucine-rich repeat 198..219 CDD:275380
LRR 7 219..240
leucine-rich repeat 220..243 CDD:275380
LRR 8 243..264
leucine-rich repeat 244..267 CDD:275380
LRR 9 267..288
leucine-rich repeat 268..289 CDD:275380
LRRCT 300..351 CDD:214507
IG 359..441 CDD:214652
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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