Protein Alignment CG5096 and lingo1a

DIOPT Version :10

• Sequence 1: NP_723576.1
• Gene: CG5096 / 34410
• FlyBaseID: FBgn0032235
• Length: 491
• Species: Drosophila melanogaster
• Sequence 2: XP_005174327.1
• Gene: lingo1a / 564943
• ZFINID: ZDB-GENE-080327-16
• Length: 615
• Species: Danio rerio
• Alignment Length: 379
• Identity: 88/379 - (23%)
• Similarity: 156/379 - (41%)
• Gaps: 93/379 - (24%)

  Fly    49 KCNCYIDTNLLDCSEK----LQDWLSAED-WEDLTNGNVVFKTIN------------LEHNNLTS 96
            :|.|.:....:.|..|    :.:.:.:|. ..||:...:  ||||            ||.|..|.
Zfish    38 RCECNVQERSVLCHRKKLMSVPEGIPSETRLLDLSKNRI--KTINPDEFSAFPQLEELELNENTI 100

  Fly    97 VPILP-----KYDVENLYLANNQIDSISVGAFQNLTELVTLDLSHNRLTSKVLVPDVFKGPFTVQ 156
            ..|.|     .|.::.|.|.:|::..|.:|.|..|:.|..||:|.|::   |::.|..
Zfish   101 SAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKI---VILLDYM------- 155

  Fly   157 DFESLENLKTLNLGYNDLHSLDADLFEHIPHIEELVL--C------SNSF-HV------------ 200
             |:.|.||::|.:|.|||..:....|..:..:|:|.|  |      :.:| |:
Zfish   156 -FQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLN 219

  Fly   201 IDQLSETAISGLQSLKILDV-SYMEIDDLPDTILHGPRDLEIFIAAGNLFNQLPKALKYATNLTS 264
            |:.:.:.:...|..||:|:: ::..:|.:....|:|.....:.|...||.:....||::...|..
Zfish   220 INSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLNLTSLTITNANLTSIPYLALRHLVYLRF 284

  Fly   265 LVLNENPIENLIGDNVFPPLTKLTHLSMTFMSKLYKIGPGAFSELQSLTELILSDNKLLNEIDEE 329
            |.::.|||:.:.|:.:...|.         :.:||.:| |..|.::..:...|:..|:||
Zfish   285 LNMSYNPIQMIEGNRLHDLLR---------LQELYLVG-GRLSVIEPYSFRGLNYLKVLN----- 334

  Fly   330 ALSKNVTGGQYLDYPPLEKVYLNNCNVSTLPKELLVRWDKLKALDLRFNPWNCD 383
             :|.|.                    ::||.:.:......|:.|.|..||..||
Zfish   335 -VSSNF--------------------LTTLEESVFHSVGNLETLALHDNPLACD 367

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5096	NP_723576.1	LRR	54..>322	CDD:443914	72/311 (23%)
		leucine-rich repeat	85..104	CDD:275380	10/35 (29%)
		leucine-rich repeat	105..128	CDD:275380	7/22 (32%)
		leucine-rich repeat	129..163	CDD:275380	9/33 (27%)
		leucine-rich repeat	164..187	CDD:275380	7/22 (32%)
		leucine-rich repeat	188..214	CDD:275380	8/46 (17%)
		leucine-rich repeat	215..238	CDD:275380	6/23 (26%)
		leucine-rich repeat	239..261	CDD:275380	5/21 (24%)
		leucine-rich repeat	262..286	CDD:275380	7/23 (30%)
		leucine-rich repeat	287..311	CDD:275380	5/23 (22%)
		leucine-rich repeat	346..369	CDD:275380	2/22 (9%)
		leucine-rich repeat	370..388	CDD:275380	7/14 (50%)
lingo1a	XP_005174327.1	LRRNT	34..68	CDD:214470	5/29 (17%)
		leucine-rich repeat	66..89	CDD:275380	6/24 (25%)
		LRR	<69..>279	CDD:443914	56/222 (25%)
		leucine-rich repeat	90..113	CDD:275380	6/22 (27%)
		leucine-rich repeat	114..137	CDD:275380	7/22 (32%)
		leucine-rich repeat	138..185	CDD:275380	17/57 (30%)
		leucine-rich repeat	186..209	CDD:275380	6/22 (27%)
		leucine-rich repeat	210..257	CDD:275380	8/46 (17%)
		leucine-rich repeat	234..256	CDD:275380	5/21 (24%)
		leucine-rich repeat	258..281	CDD:275380	5/22 (23%)
		leucine-rich repeat	282..305	CDD:275380	6/22 (27%)
		LRR_8	305..364	CDD:404697	17/94 (18%)
		leucine-rich repeat	306..329	CDD:275380	6/23 (26%)
		leucine-rich repeat	330..350	CDD:275380	7/45 (16%)
		PCC	334..>416	CDD:188093	12/60 (20%)
		Ig	416..507	CDD:472250
		Ig strand B	435..439	CDD:409353
		Ig strand C	448..452	CDD:409353
		Ig strand E	473..477	CDD:409353
		Ig strand F	487..492	CDD:409353
		Ig strand G	500..503	CDD:409353