DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5096 and zgc:153913

DIOPT Version :9

Sequence 1:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001073448.1 Gene:zgc:153913 / 559700 ZFINID:ZDB-GENE-061103-397 Length:496 Species:Danio rerio


Alignment Length:426 Identity:109/426 - (25%)
Similarity:165/426 - (38%) Gaps:63/426 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 CNCYIDTNLLDCSEKLQDWLSAEDWEDLTNGNVVFKTI-NLEHNNLTSVPILPKYDVENLYLANN 113
            |.|:..:.|: ||:.....|.......:....||...| :|:..:......|.|     |...|.
Zfish    25 CQCFSGSKLV-CSDDRMKSLPVNISTQVRELIVVASGIPDLDQQSFPETLRLSK-----LVFLNG 83

  Fly   114 QIDSISVGAFQNLTELVTLDLSHNRLTSKVLVPDVFKGPFTVQDFESLENLKTLNLGYNDLHSLD 178
            .:.|:|..||:.|.||..|::|.|          :......:|.|.||.||..|.|..|.|..:|
Zfish    84 MLKSVSGEAFERLVELRELEISGN----------ICWMSLDIQTFSSLTNLTRLLLNNNKLSGVD 138

  Fly   179 ADLFEHIPHIEELVLCSN---------------------SFHVIDQLSETAISGLQSLKILDVSY 222
            |.||..:..:|.|.|..|                     ||:.|..||.........|::|.:..
Zfish   139 AGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQA 203

  Fly   223 MEIDDLPDTILHGPRDLEIFIAAGNLFNQLPKALKYATNLTSLVLNENPIENLIGDNVFPPLTKL 287
            .:|.:|||.|......|:......||...|... .:..:|.:|:|.:|.:|.|. :.||..|..:
Zfish   204 NKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPG-SFPASLKTLILKKNLLEKLT-NAVFHTLHYI 266

  Fly   288 THLSMTFMSKLYKIGPGAFSELQSLTELILSDNKL----------LNEIDEEALSKN----VTGG 338
            |:|.:: .:.|.::....|..|.||..|.||:|::          |..|....|.||    |...
Zfish   267 TYLDLS-QNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSLISVDAH 330

  Fly   339 QYLDYPPLEKVYLNNCNVSTLPKELLVRWDKLKALDLRFNPWNCDESNDFLINVLIDRINKTTPV 403
            ...|...|:.:.|:|.::.::|.......|.....:||.|||:||....:..:.|     |....
Zfish   331 LLKDQHDLQLLDLSNNSLRSIPSGFFEDLDFQCVFELRGNPWSCDCGIHYFYDWL-----KYNHK 390

  Fly   404 LAKD---VKCGGPNKLNDVTLLRVANEHMIESSTGS 436
            ..||   |.|..|..:....|..|..|.::.|...|
Zfish   391 HVKDLSRVSCEAPELIQGHNLRSVDREQLVCSRNSS 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5096NP_723576.1 LRR_RI 69..378 CDD:238064 87/344 (25%)
leucine-rich repeat 85..104 CDD:275380 4/19 (21%)
LRR_8 105..174 CDD:290566 21/68 (31%)
leucine-rich repeat 105..128 CDD:275380 7/22 (32%)
leucine-rich repeat 129..163 CDD:275380 8/33 (24%)
LRR_8 163..222 CDD:290566 21/79 (27%)
leucine-rich repeat 164..187 CDD:275380 9/22 (41%)
leucine-rich repeat 188..214 CDD:275380 9/46 (20%)
leucine-rich repeat 215..238 CDD:275380 7/22 (32%)
leucine-rich repeat 239..261 CDD:275380 4/21 (19%)
LRR_8 260..322 CDD:290566 20/61 (33%)
leucine-rich repeat 262..286 CDD:275380 9/23 (39%)
leucine-rich repeat 287..311 CDD:275380 5/23 (22%)
leucine-rich repeat 346..369 CDD:275380 4/22 (18%)
leucine-rich repeat 370..388 CDD:275380 7/17 (41%)
zgc:153913NP_001073448.1 leucine-rich repeat 75..98 CDD:275380 9/27 (33%)
LRR_RI 141..>350 CDD:238064 52/211 (25%)
LRR_8 147..206 CDD:290566 11/58 (19%)
leucine-rich repeat 148..171 CDD:275380 4/22 (18%)
leucine-rich repeat 172..195 CDD:275380 5/22 (23%)
LRR_8 194..252 CDD:290566 15/58 (26%)
leucine-rich repeat 196..219 CDD:275380 7/22 (32%)
leucine-rich repeat 220..241 CDD:275380 4/21 (19%)
leucine-rich repeat 242..265 CDD:275380 9/23 (39%)
leucine-rich repeat 266..289 CDD:275380 5/23 (22%)
LRR_8 267..324 CDD:290566 16/57 (28%)
leucine-rich repeat 290..313 CDD:275380 6/22 (27%)
leucine-rich repeat 314..337 CDD:275380 6/22 (27%)
leucine-rich repeat 338..359 CDD:275380 4/20 (20%)
TPKR_C2 370..>404 CDD:301599 11/38 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3266
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.