DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5096 and CG7800

DIOPT Version :10

Sequence 1:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster


Alignment Length:562 Identity:118/562 - (20%)
Similarity:176/562 - (31%) Gaps:231/562 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DSKLCKKCNCYIDTNLLDCSEKLQDWLSAEDWEDLTNGNVVFKTINLEH--------NNLTSVPI 99
            |.|..|....::|:    |.:|:...:..            .:|:.||:        |:|..:|.
  Fly    40 DKKATKLTEFHMDS----CEKKVLKLMPN------------LRTLELENCDSPDFTMNDLNQLPY 88

  Fly   100 LPKYDVEN-------------------LYLANNQIDSISVGAFQNLTELVTLDLSHNRLTSKVLV 145
            |....:..                   |.|..|.|..:|...|:.|.:|..|.|..|.:...   
  Fly    89 LTSLQLRRGNLLGLHDEHFSKWPNMKILMLGGNNITRLSNECFKGLAQLWLLSLPGNGIQGL--- 150

  Fly   146 PDVFKGPFTVQDFESLENLKTLNLGYNDLHSLDADLFEHIPHIEELVLCSNSFHVIDQLSETAIS 210
                  |:.|  |::|..|..|:|..|.:.:|..::|..:|.:|.|:|..|.   :..::.|::.
  Fly   151 ------PWDV--FQNLPELLHLDLSGNRIETLHENIFTGVPKLEMLLLNGNP---LTWIAPTSLK 204

  Fly   211 GLQSLKILDVSYMEIDDLPDTILHGPRDL---------------------------EIFI----- 243
            .|.:|::||:|  ....|||..|.|...|                           ||.:     
  Fly   205 SLSNLRLLDMS--NCGPLPDLSLPGAHTLILDNSGVQRLDILGSVHKLQARKNHITEIKLPDKSS 267

  Fly   244 -----AAGNLF--NQLPKALKYATNLTSLVLNENPIENLIG-------DN-----VFP------- 282
                 ...||.  ..:||.|.....|..|.|:    ||:||       ||     :.|       
  Fly   268 VIELDLHSNLLTATDIPKLLTGMWRLQRLDLS----ENIIGIYAAAGSDNTSELFILPNLMYMNL 328

  Fly   283 --------------PLTKLTHLSMTFMSKLY---KIGPGAFSELQSLTELILSDNKLLNEIDEEA 330
                          |..:||||..:: :::|   |:|......||||                  
  Fly   329 SANRLTRLHFDSPIPWERLTHLDASY-NRIYAPAKVGIDEAFNLQSL------------------ 374

  Fly   331 LSKNVTGGQYLDYPPLEKVYLNNCNVSTLPKELLVRWDKLKAL------DLRFNPWNCDESNDFL 389
                          .||..|:||..        |..|....:|      |.:|.|........|.
  Fly   375 --------------HLEGNYINNFE--------LTPWKPHPSLKEVALYDNKFQPKGYKNITKFF 417

  Fly   390 ----INVL----IDRINKTTPVL------AKDVKCGGPNKL----------------NDVTLLRV 424
                :|||    ..:.|.|||..      |:|.    |..:                ||.....|
  Fly   418 NEIGVNVLEKTQYSQSNNTTPTCKPCIPDARDF----PTSISADTNQTIDTKVNPLSNDTYQWNV 478

  Fly   425 ANEHMIESSTGSLIWVGLLVVLLI------------AVPTII 454
            .|..|:.|...||.....|:|.||            :||.||
  Fly   479 WNVLMLVSLIVSLFVNSFLIVKLIRLRGRNQFTQSSSVPAII 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5096NP_723576.1 LRR 54..>322 CDD:443914 77/369 (21%)
leucine-rich repeat 85..104 CDD:275380 7/26 (27%)
leucine-rich repeat 105..128 CDD:275380 7/41 (17%)
leucine-rich repeat 129..163 CDD:275380 8/33 (24%)
leucine-rich repeat 164..187 CDD:275380 6/22 (27%)
leucine-rich repeat 188..214 CDD:275380 6/25 (24%)
leucine-rich repeat 215..238 CDD:275380 9/22 (41%)
leucine-rich repeat 239..261 CDD:275380 8/60 (13%)
leucine-rich repeat 262..286 CDD:275380 11/56 (20%)
leucine-rich repeat 287..311 CDD:275380 8/26 (31%)
leucine-rich repeat 346..369 CDD:275380 7/22 (32%)
leucine-rich repeat 370..388 CDD:275380 4/23 (17%)
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380 3/21 (14%)
leucine-rich repeat 65..85 CDD:275380 5/19 (26%)
LRR 68..482 CDD:443914 99/478 (21%)
leucine-rich repeat 89..112 CDD:275380 1/22 (5%)
leucine-rich repeat 113..136 CDD:275380 7/22 (32%)
leucine-rich repeat 137..160 CDD:275380 8/33 (24%)
leucine-rich repeat 161..184 CDD:275380 6/22 (27%)
leucine-rich repeat 185..208 CDD:275380 6/25 (24%)
leucine-rich repeat 209..246 CDD:275380 10/38 (26%)
leucine-rich repeat 247..267 CDD:275380 2/19 (11%)
leucine-rich repeat 268..292 CDD:275380 5/23 (22%)
leucine-rich repeat 293..322 CDD:275380 9/32 (28%)
leucine-rich repeat 395..406 CDD:275378 2/10 (20%)

Return to query results.
Submit another query.