DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5096 and CG4950

DIOPT Version :10

Sequence 1:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_648855.2 Gene:CG4950 / 39783 FlyBaseID:FBgn0036587 Length:574 Species:Drosophila melanogaster


Alignment Length:556 Identity:120/556 - (21%)
Similarity:219/556 - (39%) Gaps:134/556 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FCIVLSQVSGQTKDETTTTETPKEKIKVIDSKLCKKCNCYIDTNLLDCSEKLQDWLSAEDWEDLT 78
            ||.|.......:::.......|...:|.:  |..:....|:..:|.:....|:..       |::
  Fly    47 FCTVTGFTVTHSQNVVIKNIPPGNMVKFM--KFYESTLLYMPFHLFETFPYLKTL-------DVS 102

  Fly    79 NGNVVFKT------------INLEHNNLTSVP--------ILPKYDVENLYLANNQIDSISVGAF 123
            |.|::..|            :||.:|||||:.        :|.:.|     |:.|:|.|:||.||
  Fly   103 NTNILELTRNAFSAASNLTYLNLAYNNLTSIQTSVFIGANVLMRLD-----LSYNEISSLSVNAF 162

  Fly   124 QNLTELVTLDLSHNRLTSKVLVPDVFKG---------------PFTVQDFESLENLKTLNLGYND 173
            ..|..:..:.|:.|.|  |.|..|:||.               ....:.|.::..:|.:||..|.
  Fly   163 CGLHTISQIYLTGNLL--KELHNDIFKDNEYLEKVSFEGNLLTSIQPEVFRNMRRIKEVNLSNNR 225

  Fly   174 LHSLDADLFEHIPHIEELVLCSNSF--------HVIDQ--LSETAISGL--QSLKILDVSYMEID 226
            |..:..|.|.....:|.|||..|..        :::.|  |....::.|  .:.:.:..|:.:|.
  Fly   226 LIFIHPDTFADAASLENLVLSYNELKNFQLTEKNIVHQLHLDNNYLTNLTINATRFVRASHNQIS 290

  Fly   227 DLPDTILHGPRDLEIFIAAGNLFNQLPKALKYATNLTSLV---LNENPIENLIGDNVFPPLTKLT 288
            :|   .||....:|....:.|..:    ::...||:|.::   :::|||..| ..:.|..|.:|.
  Fly   291 EL---FLHQSLHIETLDLSANKLS----SISNITNITHMLYLDVSDNPIGPL-NISTFSQLKRLR 347

  Fly   289 HLSMTFMSKLYKIGPGAFSELQSLTELILSDNKL--LN--------------EIDEEALSKNVTG 337
            .|::. .:.:.::..|.||:.:.|.||.||.|.|  ||              .||...|:: :.|
  Fly   348 GLNLR-GTGIRELKFGMFSKQKYLEELDLSFNNLTILNLDMFVPYLTNLKKFLIDGNGLTE-LQG 410

  Fly   338 GQYLD--YPPLEKVYLN----NCNV-------STLPKELLVRWDKLKALD--LRFNPWNCDESND 387
            .:...  :|.|:|:.::    ||:.       .:||:.:::..:....||  ......:|...:.
  Fly   411 NRTFSEAFPQLQKLGVSRNRFNCSYLHHLLIPPSLPESVVLNIEPDTNLDETPHIRDVSCISQSQ 475

  Fly   388 FLINVLI----DRINKTTPVLAKDVKCGGPNKLNDVTLLRVANEHMIESSTGSLIWVGLLVVLLI 448
            .::|...    .::.....:|:|.:...|.:..|  ..|.:|...:.....|.|:.||  ||.||
  Fly   476 EVVNASFTAEESKLESQIQMLSKQLDIVGSHSKN--LELHLAFMQIFAYVMGGLVLVG--VVSLI 536

  Fly   449 AVPTIIGAYVMKRRGCFGVFRRHDSGASSALYNRTS 484
            .:     .|:..:|              |..|:|:|
  Fly   537 TL-----RYLKNQR--------------SGRYDRSS 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5096NP_723576.1 LRR 54..>322 CDD:443914 75/317 (24%)
leucine-rich repeat 85..104 CDD:275380 9/38 (24%)
leucine-rich repeat 105..128 CDD:275380 9/22 (41%)
leucine-rich repeat 129..163 CDD:275380 9/48 (19%)
leucine-rich repeat 164..187 CDD:275380 7/22 (32%)
leucine-rich repeat 188..214 CDD:275380 8/37 (22%)
leucine-rich repeat 215..238 CDD:275380 5/22 (23%)
leucine-rich repeat 239..261 CDD:275380 2/21 (10%)
leucine-rich repeat 262..286 CDD:275380 7/26 (27%)
leucine-rich repeat 287..311 CDD:275380 5/23 (22%)
leucine-rich repeat 346..369 CDD:275380 6/33 (18%)
leucine-rich repeat 370..388 CDD:275380 3/19 (16%)
CG4950NP_648855.2 LRR 96..411 CDD:443914 80/338 (24%)
leucine-rich repeat 96..119 CDD:275380 5/29 (17%)
leucine-rich repeat 120..143 CDD:275380 7/22 (32%)
leucine-rich repeat 144..167 CDD:275380 11/27 (41%)
leucine-rich repeat 168..191 CDD:275380 8/24 (33%)
leucine-rich repeat 192..215 CDD:275380 1/22 (5%)
leucine-rich repeat 216..239 CDD:275380 7/22 (32%)
leucine-rich repeat 240..299 CDD:275380 13/61 (21%)
leucine-rich repeat 300..321 CDD:275380 4/24 (17%)
leucine-rich repeat 322..345 CDD:275380 6/23 (26%)
leucine-rich repeat 346..365 CDD:275380 3/19 (16%)
leucine-rich repeat 370..394 CDD:275380 9/23 (39%)
leucine-rich repeat 395..420 CDD:275380 4/25 (16%)

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