DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5096 and CG5819

DIOPT Version :10

Sequence 1:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_611660.1 Gene:CG5819 / 37547 FlyBaseID:FBgn0034717 Length:915 Species:Drosophila melanogaster


Alignment Length:574 Identity:138/574 - (24%)
Similarity:208/574 - (36%) Gaps:174/574 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VIDSKLCKKCNC--------YIDTNLLDCSEK-LQ-----DWLSAEDWEDLTNGNVVFKTINLEH 91
            ||.|  |:..||        .:|:...|||.: ||     |.:..|..:...|..:.|.|:..:.
  Fly    14 VISS--CRAVNCPWPCRCTWVVDSLYADCSRRSLQTYPNFDGIPVEHLDLSGNKFLEFPTLYADI 76

  Fly    92 NNLTSVPILPKY-------------DVENLYLANNQID---SISVG-AFQNLTELVTLDLSHNR- 138
            ::|..:.:...|             .:..|.||||.||   |:|.. ||:....|..|.|..|| 
  Fly    77 DSLIYLDLSSNYISSIGAKTLIGFTSLRTLLLANNSIDSWESLSPNEAFKYAPSLKRLGLDGNRL 141

  Fly   139 -----------LTSKVLVPDVFKGPFTV------QDFESLENLKTLNLGYNDLHSLDA------- 179
                       |||..|. |:......:      |....|.||:.|||..|.|..:.|       
  Fly   142 GSFGNGESFELLTSSSLT-DLGLSSCGISSIGGDQMVNQLPNLERLNLANNQLAQIAALPSRTLR 205

  Fly   180 --DL------------FEHIPHIEELVLCSNSFHVIDQLSETAISGLQSLKILDVSYMEIDDLPD 230
              ||            .:.:.::|.|.|..|:....|.|||..|. ...|:.|||||..:|.:. 
  Fly   206 VLDLSNCSIKNLSGFFLDAMQNLEALNLSRNTELQFDSLSEDPIL-TYMLRKLDVSYCNLDSIE- 268

  Fly   231 TILHGPRDLEIFIAAGNLFNQLPKALKYATN--LTSLVLNENPIENLIGDNVFPPLTKLTHLSMT 293
              |.|...|......|||. ::.....:|.|  |..:.|::|.:.: ||.:.|..|.:|..|::.
  Fly   269 --LSGLPQLTEVRLQGNLL-RVVDVNTFANNSMLEVVDLSQNVLRH-IGQDAFAKLKRLKELNLA 329

  Fly   294 F--------------------------MSKLYKIGPG-------AFSELQSLTELILSDNKLLNE 325
            |                          :.||.||...       ::.|:.|:....||...::.:
  Fly   330 FNEIARLDRNFIRNNDVLVELNLSRNVLQKLTKIVSNSVRTINMSWCEITSIESTALSSLSVIQK 394

  Fly   326 IDEEALSKN--------------------------VTGGQYLDYPPLEKVYLN-NCNVSTLPKEL 363
            :|   ||.|                          |....:.::|.|..::|| |...|.:|...
  Fly   395 LD---LSNNLITDMPTFMRSETLQQLNLANCRLTTVRNNTFREFPELADLHLNGNRLTSPIPPNY 456

  Fly   364 LVRWDKLKALD---LRFNPWNCDESNDFLINVLIDRINKTTPVLAKD---VKCGGP----NKL-- 416
               :|..|.||   |..|||.||..:...:: ..|.:. ..|...||   ::|..|    .||  
  Fly   457 ---FDGNKFLDQLWLGDNPWICDCHSPLFVD-FYDYLT-AKPAKIKDRNHLRCAAPAVFYGKLWE 516

  Fly   417 ---NDVTLLRVANEHMIESSTGSLIWVGLLVVLLIAVPTIIG-----AYVMKRR 462
               .||.:|....     ||||...|..:::.||.....::|     .|:.||:
  Fly   517 FACADVWILNART-----SSTGEKAWSIIMLTLLGLGALVLGYACLQKYLRKRK 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5096NP_723576.1 LRR 54..>322 CDD:443914 88/364 (24%)
leucine-rich repeat 85..104 CDD:275380 3/31 (10%)
leucine-rich repeat 105..128 CDD:275380 11/26 (42%)
leucine-rich repeat 129..163 CDD:275380 12/51 (24%)
leucine-rich repeat 164..187 CDD:275380 9/43 (21%)
leucine-rich repeat 188..214 CDD:275380 9/25 (36%)
leucine-rich repeat 215..238 CDD:275380 9/22 (41%)
leucine-rich repeat 239..261 CDD:275380 5/21 (24%)
leucine-rich repeat 262..286 CDD:275380 7/23 (30%)
leucine-rich repeat 287..311 CDD:275380 8/56 (14%)
leucine-rich repeat 346..369 CDD:275380 6/23 (26%)
leucine-rich repeat 370..388 CDD:275380 9/20 (45%)
CG5819NP_611660.1 RNA1 <56..193 CDD:444072 35/137 (26%)
leucine-rich repeat 56..78 CDD:275380 4/21 (19%)
leucine-rich repeat 79..102 CDD:275380 2/22 (9%)
leucine-rich repeat 103..130 CDD:275380 11/26 (42%)
leucine-rich repeat 131..155 CDD:275380 6/23 (26%)
LRR 134..>466 CDD:443914 79/344 (23%)
leucine-rich repeat 158..182 CDD:275380 4/24 (17%)
leucine-rich repeat 204..227 CDD:275380 2/22 (9%)
leucine-rich repeat 254..274 CDD:275380 9/22 (41%)
leucine-rich repeat 275..298 CDD:275380 6/23 (26%)
leucine-rich repeat 299..322 CDD:275380 7/23 (30%)
leucine-rich repeat 323..346 CDD:275380 3/22 (14%)
leucine-rich repeat 347..391 CDD:275380 8/43 (19%)
leucine-rich repeat 392..413 CDD:275380 4/23 (17%)
leucine-rich repeat 414..437 CDD:275380 1/22 (5%)
LRRCT 471..517 CDD:214507 13/47 (28%)

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