Sequence 1: | NP_723576.1 | Gene: | CG5096 / 34410 | FlyBaseID: | FBgn0032235 | Length: | 491 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101223.1 | Gene: | Lrrc4c / 311236 | RGDID: | 1311013 | Length: | 640 | Species: | Rattus norvegicus |
Alignment Length: | 351 | Identity: | 84/351 - (23%) |
---|---|---|---|
Similarity: | 144/351 - (41%) | Gaps: | 93/351 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 VIDSKLCKK-CNCYIDTNLLDCSEK----LQDWLSAEDWEDLTNGNVVFKTINLEHNNLTSVPIL 100
Fly 101 P-KY--DVENLYLANNQIDSISVGAFQNLTELVTLDLSHNRLTSKVLVPDVFKGPFTVQDFESLE 162
Fly 163 NLKTLNLGYNDLHSLDADLFEHIPHIEELVLCSNSFHVIDQLSETAISGLQSLKILDVSYMEIDD 227
Fly 228 LPDTILHGPRDLEIFIAAGNLFNQLPKALKYATNLTSLVLNENPIENLIGDNVFPPLTKLTHLSM 292
Fly 293 TFMSKLYKIGPGAFSELQSLTELILSDNKLLNEIDEEALSKNVTGGQYLDYPPLEKVYLNNCNVS 357
Fly 358 TLPKELLVRWDKLKALDLRFNPWNCD 383 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5096 | NP_723576.1 | LRR_RI | 69..378 | CDD:238064 | 73/311 (23%) |
leucine-rich repeat | 85..104 | CDD:275380 | 4/21 (19%) | ||
LRR_8 | 105..174 | CDD:290566 | 27/68 (40%) | ||
leucine-rich repeat | 105..128 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 129..163 | CDD:275380 | 12/33 (36%) | ||
LRR_8 | 163..222 | CDD:290566 | 18/58 (31%) | ||
leucine-rich repeat | 164..187 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 188..214 | CDD:275380 | 7/25 (28%) | ||
leucine-rich repeat | 215..238 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 239..261 | CDD:275380 | 0/21 (0%) | ||
LRR_8 | 260..322 | CDD:290566 | 16/61 (26%) | ||
leucine-rich repeat | 262..286 | CDD:275380 | 4/23 (17%) | ||
leucine-rich repeat | 287..311 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 346..369 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 370..388 | CDD:275380 | 7/14 (50%) | ||
Lrrc4c | NP_001101223.1 | LRRNT | 47..80 | CDD:214470 | 9/43 (21%) |
PPP1R42 | 65..235 | CDD:411060 | 59/244 (24%) | ||
leucine-rich repeat | 78..101 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 102..125 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 126..149 | CDD:275380 | 12/33 (36%) | ||
leucine-rich repeat | 150..173 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 174..198 | CDD:275380 | 7/25 (28%) | ||
leucine-rich repeat | 199..220 | CDD:275380 | 8/70 (11%) | ||
LRR_8 | 220..279 | CDD:404697 | 14/69 (20%) | ||
leucine-rich repeat | 221..244 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 245..268 | CDD:275380 | 3/32 (9%) | ||
LRR_8 | 267..>301 | CDD:404697 | 8/33 (24%) | ||
leucine-rich repeat | 269..290 | CDD:275380 | 6/20 (30%) | ||
LRRCT | 301..>339 | CDD:214507 | 5/6 (83%) | ||
IG | 360..443 | CDD:214652 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |