DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5096 and lron-8

DIOPT Version :9

Sequence 1:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_491676.2 Gene:lron-8 / 181983 WormBaseID:WBGene00020693 Length:341 Species:Caenorhabditis elegans


Alignment Length:264 Identity:69/264 - (26%)
Similarity:112/264 - (42%) Gaps:66/264 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NCYIDTNLLDCS--------EKLQDWLSAEDWE------DLTNGNVVFKTINLEHNNLTSVPILP 101
            :|..|.:.:.|.        :|.||:|..:...      |||: ::|...|||.|..|       
 Worm    21 SCRTDQHEMTCRGKNSLHDLKKDQDYLEVDTLNVHQAKLDLTD-DLVPDGINLSHLTL------- 77

  Fly   102 KYDVENLYLANNQIDSISVGAFQNLTELVTLDLSHNRLTSKVLVPDVFKGPFTVQDFESLENLKT 166
                  |...:|||..|....|..:..:..|.||.|:::..  .||         .|::||.||.
 Worm    78 ------LNATDNQITRIGRRGFDKIRNMQFLYLSINQISHS--QPD---------PFQALEKLKR 125

  Fly   167 LNLGYNDLHSLDADLFEHIPHIEELVLCSNSF-HV---------IDQLSETAISGLQSLKILDVS 221
            |.:  ||  :||.::.|....:.......||| |:         |:.:......|:|.|:.|::|
 Worm   126 LEM--ND--ALDGNMEEKSDMLRNFFHSKNSFVHLAQIELNKNKIEGIYPKTFCGIQGLQRLELS 186

  Fly   222 YMEID--DLPDTILHGPRDLEIFIAAGNLFNQLPKAL-KYATNLTSLVLNENPIE-------NLI 276
            ...|.  |...|.|   ::|:..:.||||..::|..: .:..:|:||.::.|||:       .|.
 Worm   187 NNRIPSFDFARTCL---KELKALMLAGNLIQKIPADIWDFLPSLSSLDISNNPIDCDCATIRLLS 248

  Fly   277 GDNV 280
            ||:|
 Worm   249 GDDV 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5096NP_723576.1 LRR_RI 69..378 CDD:238064 63/238 (26%)
leucine-rich repeat 85..104 CDD:275380 5/18 (28%)
LRR_8 105..174 CDD:290566 19/68 (28%)
leucine-rich repeat 105..128 CDD:275380 6/22 (27%)
leucine-rich repeat 129..163 CDD:275380 8/33 (24%)
LRR_8 163..222 CDD:290566 17/68 (25%)
leucine-rich repeat 164..187 CDD:275380 8/22 (36%)
leucine-rich repeat 188..214 CDD:275380 6/35 (17%)
leucine-rich repeat 215..238 CDD:275380 7/24 (29%)
leucine-rich repeat 239..261 CDD:275380 6/22 (27%)
LRR_8 260..322 CDD:290566 10/28 (36%)
leucine-rich repeat 262..286 CDD:275380 10/26 (38%)
leucine-rich repeat 287..311 CDD:275380
leucine-rich repeat 346..369 CDD:275380
leucine-rich repeat 370..388 CDD:275380
lron-8NP_491676.2 LRR <71..>237 CDD:227223 51/196 (26%)
leucine-rich repeat 75..98 CDD:275380 7/35 (20%)
leucine-rich repeat 99..122 CDD:275380 8/33 (24%)
leucine-rich repeat 123..158 CDD:275380 12/38 (32%)
leucine-rich repeat 159..179 CDD:275380 2/19 (11%)
leucine-rich repeat 180..202 CDD:275380 7/24 (29%)
leucine-rich repeat 203..226 CDD:275380 6/22 (27%)
LRRCT 235..282 CDD:214507 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160055
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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