DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5096 and lrrc4bb

DIOPT Version :9

Sequence 1:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_003201401.1 Gene:lrrc4bb / 100535350 ZFINID:ZDB-GENE-091116-44 Length:726 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5096NP_723576.1 LRR_RI 69..378 CDD:238064
leucine-rich repeat 85..104 CDD:275380
LRR_8 105..174 CDD:290566
leucine-rich repeat 105..128 CDD:275380
leucine-rich repeat 129..163 CDD:275380
LRR_8 163..222 CDD:290566
leucine-rich repeat 164..187 CDD:275380
leucine-rich repeat 188..214 CDD:275380
leucine-rich repeat 215..238 CDD:275380
leucine-rich repeat 239..261 CDD:275380
LRR_8 260..322 CDD:290566
leucine-rich repeat 262..286 CDD:275380
leucine-rich repeat 287..311 CDD:275380
leucine-rich repeat 346..369 CDD:275380
leucine-rich repeat 370..388 CDD:275380
lrrc4bbXP_003201401.1 LRRNT 38..72 CDD:214470
LRR_8 68..128 CDD:290566
leucine-rich repeat 70..93 CDD:275380
LRR_RI 85..293 CDD:238064
leucine-rich repeat 94..117 CDD:275380
leucine-rich repeat 118..141 CDD:275380
LRR_8 140..196 CDD:290566
leucine-rich repeat 142..165 CDD:275380
leucine-rich repeat 166..190 CDD:275380
leucine-rich repeat 191..212 CDD:275380
LRR_8 212..271 CDD:290566
leucine-rich repeat 213..236 CDD:275380
leucine-rich repeat 237..260 CDD:275380
leucine-rich repeat 261..282 CDD:275380
TPKR_C2 293..343 CDD:301599
IG_like 352..435 CDD:214653
Ig 360..435 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.