DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5096 and slitrk6

DIOPT Version :10

Sequence 1:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_004911884.2 Gene:slitrk6 / 100489665 XenbaseID:XB-GENE-980871 Length:826 Species:Xenopus tropicalis


Alignment Length:672 Identity:146/672 - (21%)
Similarity:224/672 - (33%) Gaps:279/672 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 CIVLSQVSGQTKDETTTTETPKEKIKVIDSKLCKKCNCYIDTNLLDCSEKLQDWLSAEDWED--- 76
            ||:.|..||.|                 ||:|.....|   ..|..||||  |.:...:.||   
 Frog     9 CILFSIPSGMT-----------------DSELLSMAAC---KTLCLCSEK--DGIFFVNCEDKGI 51

  Fly    77 --LTNGNV---VFKTINLEHNNLTSV---PILPKYDVENLYLANNQIDSISVGAFQNLTELVTLD 133
              |:..|:   .:..:||.:|.|..:   .:....::.:|:|..|.|..|..|||.||:.|..|.
 Frog    52 INLSEINIPPFQYMDLNLLNNGLFKIHENELSSFNNIMSLHLGFNNIADIEPGAFNNLSILKKLH 116

  Fly   134 LSHNRLTSKVLVPDVFKG----PFTVQD-----------FESLENLKTLNLGYNDLHSLDADLF- 182
            ::||.|  ::|..|.|||    .|...|           |..|..||.|.|..|.:.||.:::| 
 Frog   117 INHNSL--EILRDDTFKGLENLEFLQADNNFITTIEPNTFSKLTKLKVLILNDNAIESLPSNIFR 179

  Fly   183 -----------------------EHIPHIEEL--------------------------------- 191
                                   |||..|.||                                 
 Frog   180 FVPLTHLDLRGNQLQTLPYVGLLEHIGRITELQIEDNKWVCNCDLLQLKLWLENMPRQSTIGEVV 244

  Fly   192 ------------------VLCSNSFHVIDQL-------------------SETAISGLQ------ 213
                              :.|||.    |:|                   :.|.|:.:|      
 Frog   245 CYSPSNFKGTLLRRLQNEMFCSNQ----DKLENPSWPLSLVGTASINNDRTPTKIALVQKAPTKD 305

  Fly   214 --------SLKILDVSYMEI------DDLPDTILH-----------------GPRDLEIFIAAGN 247
                    |..:|...|..:      ..||.|::|                 .||.|   |.|||
 Frog   306 PALFIPPKSSTLLPDLYCPVPCHCSSHTLPGTLIHCQERNLESLSDIGRPPQNPRKL---ILAGN 367

  Fly   248 LFNQLPKA-----------------------LKY--ATNLTSLVLNENPIENLIGDNVFPPLTKL 287
            |.|.|.|.                       |.:  .|.|..|.||.|.:..| ..::|..|..|
 Frog   368 LINVLHKGDFTDYENLEMLHLGNNHIEIVEELSFFNLTKLQKLYLNGNRLRGL-NPSMFIGLINL 431

  Fly   288 THLSMTFMSKLYKIGPGAFSELQSLTELILSDNKLLNEIDEEAL------SKNVTGGQYLDYPPL 346
            .:|.:.| :.:.:|.||.|| |.|..:::..:|.|:..:.:...      |.|:...|:|.:|  
 Frog   432 EYLYLEF-NFIKEILPGTFS-LMSRLKILYLNNNLIQFLPDHIFSGVPLTSLNLKSNQFLSFP-- 492

  Fly   347 EKVYLNNCNVSTLPKELLVRWDKLKALDLRFNPWNCDESNDFLINV--LIDRINKTTPVLAKDVK 409
                     ||.:.::|    ..|..::|:.|||.|      ..|:  |.:.:.:.|.::..::.
 Frog   493 ---------VSNVLEDL----SSLLQIELQDNPWEC------TCNIIGLKNWVQQQTNIMVSEIP 538

  Fly   410 CGGPNKLNDVTLLRVANE---------HMIESSTG----------------------SLIWVGLL 443
            |..|.:|....|..:.||         :.::||..                      |::.:|||
 Frog   539 CSNPVELLKKDLKSIQNEILCPELVITYPVQSSYPPQVATTSTVDTILRSLSDSIPLSVVILGLL 603

  Fly   444 VVLLIAVPTIIGAYVM---KRR 462
            ::||..|....|..|:   :||
 Frog   604 ILLLTTVLCSAGIIVLVLHRRR 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5096NP_723576.1 LRR 54..>322 CDD:443914 99/449 (22%)
leucine-rich repeat 85..104 CDD:275380 4/21 (19%)
leucine-rich repeat 105..128 CDD:275380 10/22 (45%)
leucine-rich repeat 129..163 CDD:275380 14/48 (29%)
leucine-rich repeat 164..187 CDD:275380 11/46 (24%)
leucine-rich repeat 188..214 CDD:275380 11/109 (10%)
leucine-rich repeat 215..238 CDD:275380 7/45 (16%)
leucine-rich repeat 239..261 CDD:275380 10/46 (22%)
leucine-rich repeat 262..286 CDD:275380 8/23 (35%)
leucine-rich repeat 287..311 CDD:275380 9/23 (39%)
leucine-rich repeat 346..369 CDD:275380 3/22 (14%)
leucine-rich repeat 370..388 CDD:275380 6/17 (35%)
slitrk6XP_004911884.2 LRR <67..>217 CDD:443914 42/151 (28%)
leucine-rich repeat 67..87 CDD:275380 4/19 (21%)
leucine-rich repeat 90..111 CDD:275380 10/20 (50%)
leucine-rich repeat 112..135 CDD:275380 10/24 (42%)
leucine-rich repeat 136..159 CDD:275380 4/22 (18%)
leucine-rich repeat 160..175 CDD:275380 7/14 (50%)
leucine-rich repeat 183..258 CDD:275380 6/74 (8%)
leucine-rich repeat 208..220 CDD:275378 3/11 (27%)
LRRCT 216..264 CDD:214507 0/47 (0%)
leucine-rich repeat 259..382 CDD:275380 26/129 (20%)
PPP1R42 337..512 CDD:455733 45/195 (23%)
leucine-rich repeat 383..406 CDD:275380 1/22 (5%)
leucine-rich repeat 407..430 CDD:275380 8/23 (35%)
leucine-rich repeat 431..454 CDD:275380 9/24 (38%)
leucine-rich repeat 455..475 CDD:275380 2/19 (11%)
leucine-rich repeat 478..500 CDD:275380 7/32 (22%)
LRRCT 511..>542 CDD:214507 8/36 (22%)

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