DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5096 and lrrc4c

DIOPT Version :9

Sequence 1:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_002938986.1 Gene:lrrc4c / 100188921 XenbaseID:XB-GENE-5772259 Length:639 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5096NP_723576.1 LRR_RI 69..378 CDD:238064
leucine-rich repeat 85..104 CDD:275380
LRR_8 105..174 CDD:290566
leucine-rich repeat 105..128 CDD:275380
leucine-rich repeat 129..163 CDD:275380
LRR_8 163..222 CDD:290566
leucine-rich repeat 164..187 CDD:275380
leucine-rich repeat 188..214 CDD:275380
leucine-rich repeat 215..238 CDD:275380
leucine-rich repeat 239..261 CDD:275380
LRR_8 260..322 CDD:290566
leucine-rich repeat 262..286 CDD:275380
leucine-rich repeat 287..311 CDD:275380
leucine-rich repeat 346..369 CDD:275380
leucine-rich repeat 370..388 CDD:275380
lrrc4cXP_002938986.1 LRRNT 47..78 CDD:214470
LRR <77..302 CDD:227223
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..149 CDD:275380
leucine-rich repeat 150..173 CDD:275380
leucine-rich repeat 174..198 CDD:275380
leucine-rich repeat 199..220 CDD:275380
leucine-rich repeat 221..244 CDD:275380
leucine-rich repeat 245..268 CDD:275380
leucine-rich repeat 269..290 CDD:275380
LRRCT 301..351 CDD:214507
Ig 354..443 CDD:416386
Ig strand A 354..357 CDD:409353
Ig strand A' 361..364 CDD:409353
Ig strand B 370..377 CDD:409353
Ig strand C 383..388 CDD:409353
Ig strand C' 391..393 CDD:409353
Ig strand D 402..406 CDD:409353
Ig strand E 409..413 CDD:409353
Ig strand F 423..430 CDD:409353
Ig strand G 433..443 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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