DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5096 and si:ch211-180f4.1

DIOPT Version :10

Sequence 1:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001373634.1 Gene:si:ch211-180f4.1 / 100144405 ZFINID:ZDB-GENE-080327-27 Length:744 Species:Danio rerio


Alignment Length:473 Identity:115/473 - (24%)
Similarity:192/473 - (40%) Gaps:98/473 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LTKSATLAAAIFCIVLSQVSGQTKDETTTTETPK---EKIKVIDSKLCKKC-------NCYIDT- 56
            ||....||.....:.:.....|...||....||:   .:.|.:|   |.:.       |..:|| 
Zfish    11 LTVCLVLAVCRCSLAVPFCPAQCVCETRPWYTPQSVYHQAKTVD---CNELHLSRIPWNISVDTQ 72

  Fly    57 -------NLLDCSEKLQDWLSAEDWEDLTNGNVVFKTINLEHNNLTSVPILPKYDVENLYLANNQ 114
                   |:...:.:||..::..:.:...|.......:.|  ||||        .:..|||..||
Zfish    73 VLLLQSNNISRGTSQLQSLVNLTELDLSQNHFTQIHDVGL--NNLT--------QLVTLYLEENQ 127

  Fly   115 IDSISVGAFQNLTELVTLDLSHNRLTSKVLVPDVFKGPFTVQDFESLENLKTLNLGYNDLHSLDA 179
            |..:.....::|..|..|.::||:::|  :.|:.|.|         |.||..|:|..|.|.::|:
Zfish   128 IKELPDMCLKDLVSLEELYINHNQISS--IGPNAFSG---------LGNLLRLHLNSNKLVAIDS 181

  Fly   180 DLFEHIPHIEELVLCSN--------SFHVIDQLSETAISGLQSLKILDVSYMEIDDLPDTILHGP 236
            ..||.:|::|.|::..|        :||.:.:|....::|           |.:.::|:....|.
Zfish   182 HWFESLPNLEILMIGENPILGLQDMNFHPLTKLHSLVLAG-----------MGLREIPEGAFQGL 235

  Fly   237 RDLEIFIAAGNLFNQLP-KALKYATNLTSLVLNENPIENLIGDNVFPPLTKLTHLSMTFMSKLYK 300
            ..||......|....:| |||:...:|..|.||:|||.. |.:..|.....|..||:..|.:|..
Zfish   236 EYLESLSFFDNKLTAVPKKALRVLPSLKFLDLNKNPIVR-IQEGDFQDFPHLEELSLNNMEELVA 299

  Fly   301 IGPGAFSELQSLTELILSDNKLLNEIDEEALSKNVTGGQYLDYPPLEKVYLNNCNVSTLPKELLV 365
            :..|:||.|..:.:|.|.:|..|..||..|         :|....|..:.::|.:::.||.|::.
Zfish   300 VERGSFSNLPQMAKLELYNNPHLFFIDRAA---------FLKMRGLRTLLIHNNDLTLLPHEIVS 355

  Fly   366 RWDKLKALDLRFNPWNCDESNDFLINVLIDRINKTTPVLAKDVKCGGPNKLN----DVTLLRVAN 426
            .:..|..:.|..||..|            |.:|...|||      |..:.|.    .:||. .:.
Zfish   356 AFPNLDEISLHSNPLRC------------DCLNNWGPVL------GNQSSLKVLEPQITLC-ASP 401

  Fly   427 EHMIESSTGSLI---WVG 441
            :|::..:...::   |.|
Zfish   402 QHLVGQALQDVVSASWNG 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5096NP_723576.1 LRR 54..>322 CDD:443914 75/284 (26%)
leucine-rich repeat 85..104 CDD:275380 5/18 (28%)
leucine-rich repeat 105..128 CDD:275380 7/22 (32%)
leucine-rich repeat 129..163 CDD:275380 9/33 (27%)
leucine-rich repeat 164..187 CDD:275380 8/22 (36%)
leucine-rich repeat 188..214 CDD:275380 7/33 (21%)
leucine-rich repeat 215..238 CDD:275380 3/22 (14%)
leucine-rich repeat 239..261 CDD:275380 7/22 (32%)
leucine-rich repeat 262..286 CDD:275380 9/23 (39%)
leucine-rich repeat 287..311 CDD:275380 9/23 (39%)
leucine-rich repeat 346..369 CDD:275380 5/22 (23%)
leucine-rich repeat 370..388 CDD:275380 5/17 (29%)
si:ch211-180f4.1NP_001373634.1 LRR 51..370 CDD:443914 92/363 (25%)
leucine-rich repeat 51..70 CDD:275380 4/21 (19%)
leucine-rich repeat 71..93 CDD:275380 4/21 (19%)
leucine-rich repeat 94..117 CDD:275380 6/32 (19%)
leucine-rich repeat 118..141 CDD:275380 7/22 (32%)
leucine-rich repeat 142..165 CDD:275380 9/33 (27%)
leucine-rich repeat 166..189 CDD:275380 8/22 (36%)
leucine-rich repeat 190..213 CDD:275380 5/22 (23%)
leucine-rich repeat 214..237 CDD:275380 5/33 (15%)
leucine-rich repeat 238..261 CDD:275380 7/22 (32%)
leucine-rich repeat 262..285 CDD:275380 9/23 (39%)
leucine-rich repeat 286..310 CDD:275380 9/23 (39%)
leucine-rich repeat 311..330 CDD:275380 7/27 (26%)
leucine-rich repeat 336..359 CDD:275378 5/22 (23%)
PCC 341..>412 CDD:188093 19/89 (21%)
leucine-rich repeat 360..372 CDD:275378 4/11 (36%)
IG_like 434..528 CDD:214653
Ig strand B 445..449 CDD:409353
Ig strand C 458..462 CDD:409353
Ig strand E 494..498 CDD:409353
Ig strand F 508..513 CDD:409353
Ig strand G 521..524 CDD:409353
Blue background indicates that the domain is not in the aligned region.

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