DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5096 and slit1

DIOPT Version :9

Sequence 1:NP_723576.1 Gene:CG5096 / 34410 FlyBaseID:FBgn0032235 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001090702.1 Gene:slit1 / 100036682 XenbaseID:XB-GENE-1007728 Length:1529 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5096NP_723576.1 LRR_RI 69..378 CDD:238064
leucine-rich repeat 85..104 CDD:275380
LRR_8 105..174 CDD:290566
leucine-rich repeat 105..128 CDD:275380
leucine-rich repeat 129..163 CDD:275380
LRR_8 163..222 CDD:290566
leucine-rich repeat 164..187 CDD:275380
leucine-rich repeat 188..214 CDD:275380
leucine-rich repeat 215..238 CDD:275380
leucine-rich repeat 239..261 CDD:275380
LRR_8 260..322 CDD:290566
leucine-rich repeat 262..286 CDD:275380
leucine-rich repeat 287..311 CDD:275380
leucine-rich repeat 346..369 CDD:275380
leucine-rich repeat 370..388 CDD:275380
slit1NP_001090702.1 LRRNT 32..63 CDD:214470
leucine-rich repeat 42..61 CDD:275380
leucine-rich repeat 62..85 CDD:275380
LRR <70..>218 CDD:227223
leucine-rich repeat 86..109 CDD:275380
leucine-rich repeat 110..133 CDD:275380
leucine-rich repeat 134..157 CDD:275380
leucine-rich repeat 158..181 CDD:275380
leucine-rich repeat 182..205 CDD:275380
leucine-rich repeat 206..310 CDD:275380
TPKR_C2 214..263 CDD:387596
LRRNT 281..312 CDD:214470
internalin_A 310..>681 CDD:380193
leucine-rich repeat 312..333 CDD:275380
leucine-rich repeat 334..357 CDD:275380
leucine-rich repeat 358..378 CDD:275380
leucine-rich repeat 406..429 CDD:275380
leucine-rich repeat 522..540 CDD:275380
internalin_A 531..>865 CDD:380193
leucine-rich repeat 541..565 CDD:275380
leucine-rich repeat 566..589 CDD:275380
leucine-rich repeat 590..613 CDD:275380
leucine-rich repeat 614..637 CDD:275380
leucine-rich repeat 638..661 CDD:275380
leucine-rich repeat 662..784 CDD:275380
leucine-rich repeat 663..753 CDD:275380
LRR_8 785..843 CDD:338972
leucine-rich repeat 785..808 CDD:275380
leucine-rich repeat 809..832 CDD:275380
leucine-rich repeat 833..853 CDD:275380
PCC 841..>978 CDD:188093
EGF 967..999 CDD:333761
EGF_CA 1003..1039 CDD:238011
EGF_CA 1042..1078 CDD:238011
EGF_CA 1083..1117 CDD:238011
EGF 1126..1155 CDD:333761
LamG 1184..1317 CDD:214598
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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