DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gny and Alg6

DIOPT Version :9

Sequence 1:NP_001260338.1 Gene:gny / 34409 FlyBaseID:FBgn0032234 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_038966196.1 Gene:Alg6 / 362547 RGDID:1308815 Length:543 Species:Rattus norvegicus


Alignment Length:515 Identity:210/515 - (40%)
Similarity:286/515 - (55%) Gaps:74/515 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AVRSIISLYSYSGFDSPP---MHGDYEAQRHWQEITVNLA------------------------- 50
            |.|...|.::|.  |:||   :..|......||......|                         
  Rat    26 AGRLCTSTFTYG--DTPPSPKLRSDTRTCVSWQPSGWRSAENSSMSRQCLRCFLICTFFSNAYRD 88

  Fly    51 VGEWYTNSSNNDLQYWGLDYPPLTAYHSYLVGRIGASIDPRFVELHKSRGFESKEHKRFMRATVV 115
            :...|.|||:|:||||||||||||||||.|...:...|:|.:|.||.|||:||:.||.|||.||:
  Rat    89 ISSRYFNSSDNNLQYWGLDYPPLTAYHSLLCAYVAKFINPDWVALHTSRGYESQAHKLFMRTTVL 153

  Fly   116 SADVLIYLPAMLLLAYSLDKAFRSDDKLFLFTLVAAYPGQTLIDNGHFQYNNISLGFAAVAIAAI 180
            :||:|||:||:||..||| |......|:.....:..|||..|||.||||||::|||||...:..:
  Rat   154 AADLLIYIPAVLLYCYSL-KEISPKRKIASALCILLYPGLILIDYGHFQYNSVSLGFALWGVLGV 217

  Fly   181 LRRRFYAAAFFFTLALNYKQMELYHSLPFFAFLLGECVSQ----KSFASFIAEISRIAAVVLGTF 241
            ........:..|.|||||||||||||||||.||||:|..:    |..|.||    |||..|:.:|
  Rat   218 SCDWDLLGSLAFCLALNYKQMELYHSLPFFCFLLGKCFKKGLRGKGSALFI----RIACTVVASF 278

  Fly   242 AILWVPWLGSLQAVLQVLHRLFPVARGVFEDKVANVWCAVNVVWKLK----KHISNDQMALVCIA 302
            .:.|:|:|...:..|||:.|||||.||:|||||||:||::||..|:|    :||   |:| :...
  Rat   279 LLCWLPFLTEREHALQVVRRLFPVDRGLFEDKVANIWCSLNVFLKIKDILPRHI---QIA-ISFC 339

  Fly   303 CTLIASLPTNVLLFRRRTNVGFLLALFNTSLAFFLFSFQVHEKTILLTALPALFLLKCWPDEMIL 367
            .|.::.||..:.|..:.:..||...|.:.:|:|||||||||||:|||.:||...:|...|.....
  Rat   340 FTFLSLLPACIKLTVQPSAKGFRFTLVSCALSFFLFSFQVHEKSILLVSLPVCLVLTEIPFMSTW 404

  Fly   368 FLEVTVFSMLPLLARDELLVPAVVATVAFHL----IFKCFDSKSKLSNEYPLK------------ 416
            ||.|:.|||||||.:|:||:|:||..:||.:    .|..|::.|:  .:..||            
  Rat   405 FLLVSTFSMLPLLLKDQLLLPSVVTVMAFLIACSTFFPMFENTSE--EQLQLKSFAVSVRRHLPG 467

  Fly   417 --YIANISQILMISVVVA-------SLTVPAPTKYPDLWPLIISVTSCGHFFLFFLWGNV 467
              ::..|.|.|.:|.|:.       |:|:..|.|.|||:.::|...||.:|..|.::.|:
  Rat   468 FTFLPRIIQCLFLSSVITMILLTILSVTLDPPQKLPDLFSVLICFVSCVNFVFFLVYFNI 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gnyNP_001260338.1 Alg6_Alg8 30..463 CDD:281190 204/493 (41%)
Alg6XP_038966196.1 Alg6_Alg8 98..521 CDD:397324 193/433 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341425
Domainoid 1 1.000 396 1.000 Domainoid score I731
eggNOG 1 0.900 - - E1_KOG2575
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6920
Inparanoid 1 1.050 404 1.000 Inparanoid score I1849
OMA 1 1.010 - - QHG55006
OrthoDB 1 1.010 - - D379099at33208
OrthoFinder 1 1.000 - - FOG0005142
OrthoInspector 1 1.000 - - oto98579
orthoMCL 1 0.900 - - OOG6_102923
Panther 1 1.100 - - LDO PTHR12413
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3661
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

Return to query results.
Submit another query.