DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gny and Alg6

DIOPT Version :9

Sequence 1:NP_001260338.1 Gene:gny / 34409 FlyBaseID:FBgn0032234 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001074733.1 Gene:Alg6 / 320438 MGIID:2444031 Length:507 Species:Mus musculus


Alignment Length:484 Identity:230/484 - (47%)
Similarity:299/484 - (61%) Gaps:32/484 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LGLAVRSIISLYSYSGFDSPPMHGDYEAQRHWQEITVNLAVGEWYTNSSNNDLQYWGLDYPPLTA 75
            |||.||..:||.||||...|||.|||||||||||||:||.|.:||.|||:|:|.|||||||||||
Mouse    13 LGLTVRWTVSLSSYSGAGKPPMFGDYEAQRHWQEITLNLPVKQWYFNSSDNNLLYWGLDYPPLTA 77

  Fly    76 YHSYLVGRIGASIDPRFVELHKSRGFESKEHKRFMRATVVSADVLIYLPAMLLLAYSLDKAFRSD 140
            |||.|...:...|:|.:|.||.|||:||:.||.||||||::||:|||:||:||..||| |.....
Mouse    78 YHSLLCAYVAKFINPDWVALHTSRGYESQAHKLFMRATVLAADLLIYVPAVLLYCYSL-KEISPK 141

  Fly   141 DKLFLFTLVAAYPGQTLIDNGHFQYNNISLGFAAVAIAAILRRRFYAAAFFFTLALNYKQMELYH 205
            .|:.....:..|||..|||.||||||::|||||...:..:........:..|.||||||||||||
Mouse   142 RKIASALCILLYPGLILIDYGHFQYNSVSLGFALWGVLGVSWDWDLLGSLAFCLALNYKQMELYH 206

  Fly   206 SLPFFAFLLGECVSQ----KSFASFIAEISRIAAVVLGTFAILWVPWLGSLQAVLQVLHRLFPVA 266
            |||||.||||:|..:    |..|.||    |||..||.:|.:.|:|:|...:..|||:.|||||.
Mouse   207 SLPFFCFLLGKCFKKGLKGKGLALFI----RIACTVLASFLLCWLPFLTEREHALQVVRRLFPVD 267

  Fly   267 RGVFEDKVANVWCAVNVVWKLKKHISNDQMALVCIACTLIASLPTNVLLFRRRTNVGFLLALFNT 331
            ||:|||||||:||:|||..|:|..:.......:....||::.||..:.|..|.:..||...|.:.
Mouse   268 RGLFEDKVANIWCSVNVFLKIKDTLPRHIQIAISFCFTLLSLLPACIKLTVRPSCKGFRFTLVSC 332

  Fly   332 SLAFFLFSFQVHEKTILLTALPALFLLKCWPDEMILFLEVTVFSMLPLLARDELLVPAVVATVAF 396
            :|:|||||||||||:|||.:||...:|...|.....||.|:.|||||||.:||||:|:||..:||
Mouse   333 ALSFFLFSFQVHEKSILLVSLPVCLVLTEIPFMSTWFLLVSTFSMLPLLLKDELLLPSVVTVMAF 397

  Fly   397 HLIFKCFDSKSKLSNEYPLK----------------YIANISQILMISVVVA-------SLTVPA 438
            .:....|....:.::|..|:                ::..|.|.|.:|.|:.       |:|:..
Mouse   398 VIACGTFFPMLENTSEEQLQLKSFAVSVRRHLPGFTFLPRIMQCLFLSSVITMVLLTILSVTLDP 462

  Fly   439 PTKYPDLWPLIISVTSCGHFFLFFLWGNV 467
            |.|.|||:|::|...||.:|..|.::.|:
Mouse   463 PQKLPDLFPVLICFVSCVNFVFFLVYFNI 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gnyNP_001260338.1 Alg6_Alg8 30..463 CDD:281190 218/459 (47%)
Alg6NP_001074733.1 Alg6_Alg8 32..487 CDD:281190 218/459 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837685
Domainoid 1 1.000 406 1.000 Domainoid score I709
eggNOG 1 0.900 - - E1_KOG2575
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6920
Inparanoid 1 1.050 413 1.000 Inparanoid score I1829
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55006
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005142
OrthoInspector 1 1.000 - - oto95085
orthoMCL 1 0.900 - - OOG6_102923
Panther 1 1.100 - - LDO PTHR12413
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R44
SonicParanoid 1 1.000 - - X3661
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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