DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gny and alg6

DIOPT Version :9

Sequence 1:NP_001260338.1 Gene:gny / 34409 FlyBaseID:FBgn0032234 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_596744.1 Gene:alg6 / 2540993 PomBaseID:SPBC342.01c Length:506 Species:Schizosaccharomyces pombe


Alignment Length:485 Identity:201/485 - (41%)
Similarity:288/485 - (59%) Gaps:55/485 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 IISLYSYSGFDSPPMHGDYEAQRHWQEITVNLAVGEWYTNSSNNDLQYWGLDYPPLTAYHSYLVG 82
            :||:..|||:::|||:||:||||||.|:|::..|.:||.    .|||:|||||||||||.|:..|
pombe    41 LISIGPYSGYNTPPMYGDFEAQRHWMELTLHTPVSQWYF----RDLQWWGLDYPPLTAYVSWFFG 101

  Fly    83 RIG-ASIDPRFVELHKSRGFESKEHKRFMRATVVSADVLIYLPAMLLLAYSLDKAFRSD---DKL 143
            .|| ...:|.:.....||||||.|.|.|||:||:::.:||.:|.  |:.||...:.|..   |:.
pombe   102 IIGHYFFNPEWFADVTSRGFESLELKLFMRSTVIASHLLILVPP--LMFYSKWWSRRIPNFVDRN 164

  Fly   144 FLFTLVAAYPGQTLIDNGHFQYNNISLGFAAVAIAAILRRRFYAAAFFFTLALNYKQMELYHSLP 208
            ....:|...|...|||:||||||.:.||....|||.:|:.::.||.|||.|||.:|||.||.:.|
pombe   165 ASLIMVLFQPALLLIDHGHFQYNCVMLGLVMYAIANLLKNQYVAATFFFCLALTFKQMALYFAPP 229

  Fly   209 FFAFLLGECVSQK-SFASFIAEISRIAAVVLGTFAILWVPWLGSLQAVL--QVLHRLFPVARGVF 270
            .|.:|||.||..| .|:.||.    ::..|:.||:::..||:......|  |:|||:||.|||::
pombe   230 IFFYLLGTCVKPKIRFSRFIL----LSVTVVFTFSLILFPWIYMDYKTLLPQILHRVFPFARGLW 290

  Fly   271 EDKVANVWCAVNVVWKLKKHISNDQMALVCIACTLIASLPTNVLLF---RRRTNVGFLLAL--FN 330
            ||||||.||.:|.|:|:::..:..|:.::.:..|||:.||:.|:||   |:|     ||||  .:
pombe   291 EDKVANFWCTLNTVFKIREVFTLHQLQVISLIFTLISILPSCVILFLYPRKR-----LLALGFAS 350

  Fly   331 TSLAFFLFSFQVHEKTILLTALPALFLL-------KCWPDEMILFLEVTVFSMLPLLARDELLVP 388
            .|..|||||||||||::||..||...||       |.|   :.|...:.|||:.|||.:|.|.:.
pombe   351 ASWGFFLFSFQVHEKSVLLPLLPTSILLCHGNITTKPW---IALANNLAVFSLWPLLKKDGLGLQ 412

  Fly   389 AVVATVAFH-----LIFKCFDSKSKLSNEYPLKYIANISQILMISVVVASLTVPAPTKYPDLWPL 448
            .....:.::     ::|    ||:.|     .::|.....:.||.::...|.:|.|::||||| :
pombe   413 YFTLVLMWNWIGDMVVF----SKNVL-----FRFIQLSFYVGMIVILGIDLFIPPPSRYPDLW-V 467

  Fly   449 IISVT-SCGHFFLFFLW--GNVQQFSSKLS 475
            |::|| |...||..:||  |.:...|||||
pombe   468 ILNVTLSFAGFFTIYLWTLGRLLHISSKLS 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gnyNP_001260338.1 Alg6_Alg8 30..463 CDD:281190 188/457 (41%)
alg6NP_596744.1 Alg6_Alg8 53..484 CDD:281190 188/458 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 307 1.000 Domainoid score I248
eggNOG 1 0.900 - - E1_KOG2575
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6920
Inparanoid 1 1.050 313 1.000 Inparanoid score I570
OMA 1 1.010 - - QHG55006
OrthoFinder 1 1.000 - - FOG0005142
OrthoInspector 1 1.000 - - oto102019
orthoMCL 1 0.900 - - OOG6_102923
Panther 1 1.100 - - LDO PTHR12413
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R44
SonicParanoid 1 1.000 - - X3661
TreeFam 1 0.960 - -
1413.860

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