DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr19 and Igsf9

DIOPT Version :9

Sequence 1:NP_001260336.1 Gene:dpr19 / 34408 FlyBaseID:FBgn0032233 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_001100667.1 Gene:Igsf9 / 304982 RGDID:1304566 Length:1179 Species:Rattus norvegicus


Alignment Length:343 Identity:76/343 - (22%)
Similarity:117/343 - (34%) Gaps:125/343 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VIAQKGGLAILPCVVKVNSPA------TVSWIRRKDFQL---LTVGLSTHSSDKRFLVEHTRHMG 105
            |:.:.|..|:|.|  .:..||      .:.|: |..|.|   :..||.:...|..: |...|...
  Rat    29 VVGRAGESAVLGC--DLLPPAGRPPLHVIEWL-RFGFLLPIFIQFGLYSPRIDPDY-VGRVRLQT 89

  Fly   106 HWSLRIKAVREEDRGFYECQL--------------------------SIYPTQSIVIELKIVEAV 144
            ..||:|:.:|.||:|:|||::                          ....|..:|:|:|.:|||
  Rat    90 GASLQIEGLRVEDQGWYECRVLFLDQHSPEQDFANGSWVHLTVNSPPQFQETPPLVLEVKELEAV 154

  Fly   145 AEISSAPELHIDETSTLRLECKLKRATENP-AFVFWYHDSKMINYDSQGGFVVTSIGQSNPQSGQ 208
                           |||  |.   |..:| .:|.|    |....|...|     .||...::|.
  Rat   155 ---------------TLR--CV---ALGSPQPYVTW----KFRGQDLGKG-----QGQVQVRNGT 190

  Fly   209 FY-----RSSPANKSRATMPMESS--------------------NGVLNSLLGSSDAIKAPAANV 248
            .:     |.|..:.:......|.|                    |..:|:....|.|.:|.|  .
  Rat   191 LWIRRVERGSAGDYTCQASSTEGSVTHTTQLLVLGPPVIVVPPNNNTVNASQDVSLACRAEA--Y 253

  Fly   249 PSSTPYMTQQHQSAYLLNPSVSVLTVKQVNFR-----------------HAGNYTCAPSNARP-- 294
            |::..|...|.:        ::|..:.::..|                 .||:|||.|||..|  
  Rat   254 PANLTYSWFQDR--------INVFHISRLQSRVRILVDGSLWLQATQPDDAGHYTCVPSNGFPHP 310

  Fly   295 --ASITVHVLRGEKTAAM 310
              ||..:.||...:...|
  Rat   311 PSASAYLTVLYPAQVTVM 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr19NP_001260336.1 IG_like 50..127 CDD:214653 26/111 (23%)
IGc2 55..125 CDD:197706 24/78 (31%)
Igsf9NP_001100667.1 IG 28..110 CDD:214652 26/84 (31%)
Ig strand A 136..139 CDD:409353 0/2 (0%)
IG_like 143..223 CDD:214653 24/108 (22%)
Ig strand A' 145..148 CDD:409353 1/2 (50%)
Ig strand B 154..161 CDD:409353 5/26 (19%)
Ig strand C 167..172 CDD:409353 2/8 (25%)
Ig strand C' 175..177 CDD:409353 0/1 (0%)
Ig strand D 183..187 CDD:409353 1/3 (33%)
Ig strand E 189..193 CDD:409353 1/3 (33%)
Ig strand F 202..210 CDD:409353 0/7 (0%)
Ig strand G 213..223 CDD:409353 1/9 (11%)
Ig_3 226..305 CDD:404760 17/88 (19%)
putative Ig strand A 226..230 CDD:409353 0/3 (0%)
putative Ig strand A' 235..239 CDD:409353 1/3 (33%)
putative Ig strand B 241..251 CDD:409353 2/9 (22%)
putative Ig strand C' 267..270 CDD:409353 1/2 (50%)
putative Ig strand D 279..282 CDD:409353 0/2 (0%)
putative Ig strand E 284..290 CDD:409353 0/5 (0%)
putative Ig strand F 297..305 CDD:409353 5/7 (71%)
putative Ig strand G 310..319 CDD:409353 2/8 (25%)
Ig 322..407 CDD:416386 1/7 (14%)
Ig strand A' 324..328 CDD:409353 0/3 (0%)
Ig strand B 333..347 CDD:409353
Ig strand C 353..359 CDD:409353
Ig strand C' 362..364 CDD:409353
Ig strand D 371..374 CDD:409353
Ig strand E 378..382 CDD:409353
Ig strand F 391..399 CDD:409353
Ig 418..503 CDD:416386
Ig strand A 418..421 CDD:409353
Ig strand A' 427..430 CDD:409353
Ig strand B 436..443 CDD:409353
Ig strand C 449..454 CDD:409353
Ig strand C' 457..459 CDD:409353
Ig strand D 462..466 CDD:409353
Ig strand E 469..473 CDD:409353
Ig strand F 482..490 CDD:409353
Ig strand G 493..503 CDD:409353
FN3 508..599 CDD:238020
FN3 625..715 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 766..807
PHA03247 <777..1062 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 819..846
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 869..895
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 942..979
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1016..1079
PDZ-binding. /evidence=ECO:0000250 1177..1179
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.