DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr19 and Ncam1

DIOPT Version :9

Sequence 1:NP_001260336.1 Gene:dpr19 / 34408 FlyBaseID:FBgn0032233 Length:385 Species:Drosophila melanogaster
Sequence 2:XP_038936733.1 Gene:Ncam1 / 24586 RGDID:67378 Length:1136 Species:Rattus norvegicus


Alignment Length:362 Identity:71/362 - (19%)
Similarity:123/362 - (33%) Gaps:110/362 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WHLHLSCFLLLLSSTFSDVG----KITSSQNHFGNTLQSQFNTKNNTRVIAQK------------ 54
            |:...|..|.:.::...|.|    .:|:..   |...::..|.|     |.||            
  Rat    73 WNDDDSSTLTIYNANIDDAGIYKCVVTAED---GTQSEATVNVK-----IFQKLMFKNAPTPQEF 129

  Fly    55 --GGLAILPCVVKVNSPATVSWIRR-KDFQLLTVGLSTHSSDKRFLVEHTRHMGHWSLRIKAVRE 116
              |..|::.|.|..:.|.|:.|..: :|..|        ..|.||:|....:     |:|:.:::
  Rat   130 KEGEDAVIVCDVVSSLPPTIIWKHKGRDVIL--------KKDVRFIVLSNNY-----LQIRGIKK 181

  Fly   117 EDRGFYECQ-----------------LSIYPT----QSIVIEL----KIVEAVAEISSAPELHID 156
            .|.|.|.|:                 :::.||    ||||...    :.|..|.:....||..:.
  Rat   182 TDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMS 246

  Fly   157 ETSTLRLECKLKRATENPAFVFWYHDSKMINYDSQGGFVVTSIGQSNPQSGQFYRSSPANKSRAT 221
            .|       |.....||..    ..|.|.|..|......:.::.:::.........:.|.:..|:
  Rat   247 WT-------KDGEPIENEE----EDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDAS 300

  Fly   222 M-----------------PMESSNGVLNSLLGSSDAIKAPAANVPSSTPYMTQQHQSAYL----- 264
            :                 .||....|..:...|.|.|  |:....:||..::.:.::::.     
  Rat   301 IHLKVFAKPKITYVENQTAMELEEQVTLTCEASGDPI--PSITWRTSTRNISSEEKASWTRPEKQ 363

  Fly   265 ----------LNPSVSVLTVKQVNFRHAGNYTCAPSN 291
                      .:..||.||:|.:.:..||.|.|..||
  Rat   364 ETLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASN 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr19NP_001260336.1 IG_like 50..127 CDD:214653 22/108 (20%)
IGc2 55..125 CDD:197706 18/70 (26%)
Ncam1XP_038936733.1 IgI_1_NCAM-1 20..116 CDD:409451 10/50 (20%)
Ig strand B 37..41 CDD:409451
Ig strand C 51..55 CDD:409451
Ig strand E 79..83 CDD:409451 1/3 (33%)
Ig strand F 93..98 CDD:409451 0/4 (0%)
Ig strand G 107..110 CDD:409451 0/2 (0%)
IG_like 124..190 CDD:214653 18/78 (23%)
Ig strand B 135..139 CDD:409353 1/3 (33%)
Ig strand C 148..152 CDD:409353 1/3 (33%)
Ig strand E 172..176 CDD:409353 1/8 (13%)
Ig strand F 186..191 CDD:409353 2/4 (50%)
IgI_3_NCAM-1 211..308 CDD:143207 20/107 (19%)
Ig strand B 231..235 CDD:143207 1/3 (33%)
Ig strand C 244..248 CDD:143207 0/3 (0%)
Ig strand E 271..275 CDD:143207 0/3 (0%)
Ig strand F 285..290 CDD:143207 0/4 (0%)
Ig strand G 298..301 CDD:143207 1/2 (50%)
IgI_NCAM-1 307..413 CDD:143277 20/96 (21%)
Ig strand B 326..330 CDD:143277 1/3 (33%)
Ig strand C 339..343 CDD:143277 0/3 (0%)
Ig strand E 379..383 CDD:143277 2/3 (67%)
Ig strand F 393..398 CDD:143277 2/4 (50%)
Ig strand G 406..409 CDD:143277
Ig_3 422..494 CDD:404760
Ig strand B 433..437 CDD:409353
Ig strand C 446..450 CDD:409353
Ig strand E 473..477 CDD:409353
Ig strand F 487..492 CDD:409353
FN3 509..606 CDD:238020
fn3 619..701 CDD:394996
Herpes_BLLF1 <842..1133 CDD:282904
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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