DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr19 and rig-3

DIOPT Version :9

Sequence 1:NP_001260336.1 Gene:dpr19 / 34408 FlyBaseID:FBgn0032233 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_509155.1 Gene:rig-3 / 180958 WormBaseID:WBGene00004370 Length:487 Species:Caenorhabditis elegans


Alignment Length:67 Identity:18/67 - (26%)
Similarity:31/67 - (46%) Gaps:5/67 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 LRIKAVREEDRGFYECQLSIYPTQSI-VIELKIVEAVAEISSAPELHIDETSTLRLECKLKRATE 172
            |:|..|.|.|.|.|:|:.:....:|. .|.|:...|.||    |::.:.|.....:..|::....
 Worm   312 LKIHNVNENDLGTYKCEANNIKAKSYHTIHLREANAPAE----PKVTLIEDKRHSIIWKVESIDR 372

  Fly   173 NP 174
            :|
 Worm   373 DP 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr19NP_001260336.1 IG_like 50..127 CDD:214653 8/17 (47%)
IGc2 55..125 CDD:197706 7/15 (47%)
rig-3NP_509155.1 IG_like 48..142 CDD:214653
Ig 267..341 CDD:319273 9/28 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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