DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr19 and dscaml1

DIOPT Version :9

Sequence 1:NP_001260336.1 Gene:dpr19 / 34408 FlyBaseID:FBgn0032233 Length:385 Species:Drosophila melanogaster
Sequence 2:XP_005157551.1 Gene:dscaml1 / 100002762 -ID:- Length:2158 Species:Danio rerio


Alignment Length:367 Identity:80/367 - (21%)
Similarity:136/367 - (37%) Gaps:88/367 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SDVGK--------ITSSQNHFGNTLQSQFNTKNNTRVIA--------------QKGGLAI----- 59
            |||.|        ..:...:.|.|.||     |..|:..              |.|.:.:     
Zfish   254 SDVQKEDALSTYRCITKHKYSGETRQS-----NGARLSVLDPTESTPSVMDSFQSGEVQVGRSIE 313

  Fly    60 LPCVVKVNSPATVSWIRRKDFQLLTVGLSTHSSDKRFLVEHTRHMGHWSLRIKAVREEDRGFYEC 124
            |||:.......|:.|:  ||.:.|       .:|.|:    ||.:  ..|.|..:|.||.|.|.|
Zfish   314 LPCIASGYPNPTIRWL--KDGRPL-------PADSRW----TRRL--TGLTISDLRLEDSGNYIC 363

  Fly   125 QL-SIYPTQSIVIELKIVEAVAEISSAPELHIDETSTLRLECKLKRATENPAF-VFWYHDSKMI- 186
            :: :.:.::.:...|.::|.:....|...|....:||:.|.|.::   .:|.| |.|:.:::.| 
Zfish   364 EVTNSFGSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQ---GSPHFTVSWFRNTEPIV 425

  Fly   187 ---NYDSQGG----FVVTSIGQSNPQSGQFYRSSPANKSRATMPMESSNGVLNSLLGSSDAIKAP 244
               ::..||.    ..:|:..:.:..:.|.:.:.....::....:...:|....:...|:.:.||
Zfish   426 PDQHFSIQGAHNETLFITAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVSSFSERVVAP 490

  Fly   245 ---------AANVPSSTPYMTQQHQ----------SAYLLN--PSVSVLTVKQVNFRHAGNYTCA 288
                     |...|..|...|...:          |.|.|:  .:||.:.|.....|..|.|.||
Zfish   491 GEPFSLMCAAKGAPPPTITWTLDDEPVARDSAHRASQYTLSDGSTVSHVNVTNPQIRDGGVYRCA 555

  Fly   289 PSN-ARPASITVHV-LRGEKTAAMQHANRSILDTETNGNGTF 328
            ..| |..|.....: :||..:.   .|.|:|  |...|..||
Zfish   556 ARNSAGSAEYQARINVRGPPSI---RAMRNI--TAVAGRNTF 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr19NP_001260336.1 IG_like 50..127 CDD:214653 22/96 (23%)
IGc2 55..125 CDD:197706 20/74 (27%)
dscaml1XP_005157551.1 IG_like 112..184 CDD:214653
Ig 112..183 CDD:143165
Ig 194..287 CDD:299845 10/37 (27%)
I-set 302..380 CDD:254352 23/92 (25%)
IGc2 309..370 CDD:197706 20/75 (27%)
IGc2 399..458 CDD:197706 13/61 (21%)
I-set 477..571 CDD:254352 21/93 (23%)
Ig 477..567 CDD:299845 21/89 (24%)
IG_like 581..662 CDD:214653 6/14 (43%)
IGc2 588..646 CDD:197706 3/5 (60%)
Ig 684..751 CDD:143165
IG_like 686..756 CDD:214653
I-set 760..855 CDD:254352
Ig7_DSCAM 778..855 CDD:143211
IG_like 865..956 CDD:214653
Ig 873..963 CDD:299845
FN3 959..1053 CDD:238020
FN3 1060..1157 CDD:238020
FN3 1165..1271 CDD:238020
FN3 1276..1367 CDD:238020
IGc2 1392..1455 CDD:197706
FN3 1486..1559 CDD:238020
FN3 1573..1649 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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