DRSC/TRiP Functional Genomics Resources

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Protein Alignment lft and Lix1l

DIOPT Version :9

Sequence 1:NP_001188775.1 Gene:lft / 34405 FlyBaseID:FBgn0032230 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001156642.1 Gene:Lix1l / 280411 MGIID:3036267 Length:337 Species:Mus musculus


Alignment Length:234 Identity:177/234 - (75%)
Similarity:205/234 - (87%) Gaps:0/234 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RVNVVEALQEFWQMKQSRGAELKNGALVIYESIPSNSQPYICFVTLPGGSCFGSFQNCPTKAEAR 88
            ||||||||||||||||||||:|||||||:||.:||||.||:|:|||||||||||||.||||||||
Mouse    97 RVNVVEALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTKAEAR 161

  Fly    89 RSSAKIALMNSVFNEHPSRRISDEFIQKAVQDARTSFKGTSQINEGTESGIGAFRFMLEANKGRT 153
            ||:||||||||||||||||||:||||:|:|.:|..||.|..:..:...:||||||||||:|||::
Mouse   162 RSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEADNPNTGIGAFRFMLESNKGKS 226

  Fly   154 MLEFQELMTVFQLLHWNGSLKAMRERHCSRQEVVAHYSNRSLDDEMRSQMALDWIAREHDNPGVI 218
            ||||||||||||||||||||||||||.||||||:||||:|:|||::|.||||||::||...||.:
Mouse   227 MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQMALDWVSREQSVPGAL 291

  Fly   219 RRELVLAERELETFRMAGRELRFPKEKKDILMIAHNQLG 257
            .|||...||||:..|:||:||||.||||||||:|..|||
Mouse   292 SRELASTERELDEARLAGKELRFHKEKKDILMLAAGQLG 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lftNP_001188775.1 LIX1 24..255 CDD:291615 174/230 (76%)
Lix1lNP_001156642.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55
LIX1 87..328 CDD:373420 174/230 (76%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850564
Domainoid 1 1.000 365 1.000 Domainoid score I932
eggNOG 1 0.900 - - E1_2CB0Y
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 369 1.000 Inparanoid score I2128
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG50057
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007988
OrthoInspector 1 1.000 - - oto92809
orthoMCL 1 0.900 - - OOG6_106706
Panther 1 1.100 - - LDO PTHR31139
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5506
SonicParanoid 1 1.000 - - X5938
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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