DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lft and lft

DIOPT Version :10

Sequence 1:NP_609390.1 Gene:lft / 34405 FlyBaseID:FBgn0032230 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_061513525.1 Gene:lft / 1279972 VectorBaseID:AGAMI1_006977 Length:373 Species:Anopheles gambiae


Alignment Length:242 Identity:205/242 - (84%)
Similarity:224/242 - (92%) Gaps:2/242 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RVNVVEALQEFWQMKQSRGAELKNGALVIYESIPSNSQPYICFVTLPGGSCFGSFQNCPTKAEAR 88
            |||||||||||||||.:|||:||||||||||||||.||||:|:||||||||||||||||||||||
Mosquito   132 RVNVVEALQEFWQMKAARGADLKNGALVIYESIPSTSQPYVCYVTLPGGSCFGSFQNCPTKAEAR 196

  Fly    89 RSSAKIALMNSVFNEHPSRRISDEFIQKAVQDARTSFKG-TSQINEGTESGIGAFRFMLEANKGR 152
            |||||||||||||||||||||||:||:|||.:||.|||| .:|.::|.::||||||||||.||||
Mosquito   197 RSSAKIALMNSVFNEHPSRRISDDFIEKAVTEARASFKGDQNQEDDGPDTGIGAFRFMLETNKGR 261

  Fly   153 TMLEFQELMTVFQLLHWNGSLKAMRERHCSRQEVVAHYSNRSLDDEMRSQMALDWIAREHDNPGV 217
            |||||||||||||||||||||||||||.||||||||||||||||||||.|||||||.|||:|||:
Mosquito   262 TMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVVAHYSNRSLDDEMRQQMALDWIEREHENPGL 326

  Fly   218 IRRELVLAERELETFRMAGRELRFPKEKKDILMIAHNQL-GGSALNS 263
            :.|||.:|||||||.|:|||||||||||||||.:||||| |||.:||
Mosquito   327 LSRELAIAERELETARLAGRELRFPKEKKDILQMAHNQLTGGSNINS 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lftNP_609390.1 LIX1 24..255 CDD:464400 197/231 (85%)
lftXP_061513525.1 None

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