DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cand1 and cand2

DIOPT Version :10

Sequence 1:NP_609389.1 Gene:Cand1 / 34403 FlyBaseID:FBgn0027568 Length:1248 Species:Drosophila melanogaster
Sequence 2:NP_001103988.1 Gene:cand2 / 555955 ZFINID:ZDB-GENE-060503-645 Length:1231 Species:Danio rerio


Alignment Length:1248 Identity:687/1248 - (55%)
Similarity:910/1248 - (72%) Gaps:32/1248 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IANLLEKMTSTDKDFRFMATNDLMTELQKDSIILDDESEKKVVRMVLKLLEDKNGEVQNLAVKCL 73
            |:|||||||||||||||||.||||.|||||||.||:|||:|||.|:|||||||||||||||||||
Zfish     8 ISNLLEKMTSTDKDFRFMAANDLMMELQKDSIKLDEESERKVVTMLLKLLEDKNGEVQNLAVKCL 72

  Fly    74 GPLVNKVKEIQVETIVDSLCANMMSNTEQLRDISSIGLKTVIAELPQSSN--SLAPNVCQRITGK 136
            ||||.||||.||||:|::||:|||||.||||||||:||||||||||.||.  ||..:||::||.:
Zfish    73 GPLVGKVKECQVETMVETLCSNMMSNKEQLRDISSMGLKTVIAELPPSSTGLSLTVSVCRKITSQ 137

  Fly   137 LSTAI-EKEDVSVKLESLDILADLLSRFGEFLVPFHSTILKALMPQLASSRQAVRKRTIVALSFL 200
            |..|: .::|||::||:||||:|:|||....||.||.:||.:|:.||.|||.|||||:|:||..|
Zfish   138 LIGAMGMQDDVSIQLEALDILSDMLSRLSTALVSFHQSILTSLLAQLMSSRMAVRKRSIIALGHL 202

  Fly   201 LIQANSNAYNGVIDHLLDGLENPPNPAAIRTYIQCLASICRQAGHRLCNHIDRSMLLLSQYSQRD 265
            :...:...:..:.:||:..|...|..|.:||||||||:|.||.|||:..|:::.:.::.::...:
Zfish   203 VPSCSPALFTQLTEHLMGELSRGPPTANVRTYIQCLATISRQGGHRIGEHLEKIVPMVVKFCNVE 267

  Fly   266 DDELREFCLQACEAFVMRCPDAINPHIPMILELCLNYITYDPNYNYETDDGDTGNAMDTEDDEYV 330
            ||||||||.||.||||.||...::||||.|::|||.||:|||||||:.|| |..::||.||.|..
Zfish   268 DDELREFCFQAFEAFVSRCSKEMSPHIPTIIKLCLKYISYDPNYNYDADD-DEDDSMDIEDREDE 331

  Fly   331 DSE---EYSDDDDMSWKVRRAAAKCLEVLISTRQELVEDFYRSLSPALIARFKEREENVKSDIFH 392
            |.|   ||||||||||||||::.||||.:||:|::|:.:.|.|:.|.|::||||||||||:|||.
Zfish   332 DQESDDEYSDDDDMSWKVRRSSVKCLEAIISSRRDLLVELYGSVGPTLVSRFKEREENVKTDIFS 396

  Fly   393 AYVALLKNTRLTDDVANDHDSMDQVSGPTSLLIEQLPLIVKAIQPLMREKSMKTRQDCFLLLREL 457
            |:||||:.||.......|.:|.::.:  .:||.:|:|.||||:...::||||:.||.||.||.|:
Zfish   397 AFVALLRQTRHPHGPTLDTESKEEPA--VTLLKKQVPTIVKALHRQLKEKSMRCRQGCFSLLTEM 459

  Fly   458 LNSLPGALGPYLDSIVPGISYSLNDKSSTSNMKIESLGFLYSLLQGHPPHVFHPHIPLLVPLVVT 522
            .|.|||.||.::.:::|||.|||.||||:|||||::|.||..||..|.|.||||||.:::..|:.
Zfish   460 ANVLPGELGEHIPALIPGIIYSLTDKSSSSNMKIDALSFLNVLLSSHNPEVFHPHISVILTPVIQ 524

  Fly   523 SVFDPFYKIATEALLVLQQLVKVIRPLEPNAAKSDFDAPSFVGQVYSCTLQKLKVTDVDQEVKER 587
            .|.||||||.:|||.|.||:||:|||||...:   |||..:|..:::||.::||..|:|||||||
Zfish   525 CVEDPFYKITSEALQVTQQIVKLIRPLEKPVS---FDAKPYVKNIFACTSKRLKAADIDQEVKER 586

  Fly   588 AIACMGQIIANMGDMLQNELAVCLPIFMERLKNEVTRLSSVKALTLIAASSLRIDLTPILHDVLP 652
            ||.|||.|::::||.|..:|...|.||:||||||:|||.:||.|||:|:|.|:|||.|||.:.:|
Zfish   587 AIFCMGHILSHLGDHLGADLQPTLQIFLERLKNEITRLIAVKTLTLVASSQLKIDLRPILTEGIP 651

  Fly   653 ALGTFLRKNHRALKLHSLDLINKIVINYSSNFEANLLQTAIVEIPPLISDSDLHVAQYSLTLLST 717
            .||:|||||.|.|||:::.::|.||.|||.:|:..|:::.:.|:|.||.::|:|::|.::.|::.
Zfish   652 VLGSFLRKNQRVLKLNTITVLNVIVTNYSDSFKPPLIESILSEVPALIQENDMHISQVAINLITC 716

  Fly   718 VARRQPQALVGIHEQFLRSVLILVRSPLLQGSALNCTLELFQALVQTQLSGLDYHSLVSKLMAPV 782
            :|:..|.:|..|....|..||.||.||||||.|||..|:.||.||.|:.:.:.|..|:..|..|.
Zfish   717 MAKVCPSSLSKIGGTILPEVLNLVHSPLLQGGALNSILQFFQVLVATKANNMGYSDLLKALRGPF 781

  Fly   783 LGGNGDVKSRATAGAPSEVVQLHKQAYHSSAKCIAALTQQCPQVATPLATKLITDLQ--KRNDTE 845
            .    |.||       ::.:.:|||:|:|.|||:|||:..||:.|:.|.:.||.|::  |.::..
Zfish   782 Y----DSKS-------ADSMSVHKQSYYSVAKCVAALSSVCPKEASGLVSNLIQDVKNPKSSEPV 835

  Fly   846 IIFCLLTIGEIGRHFDLSSIQVLPQTIIECFGATSEDVKAAASHALGAVSVGSLQTYLPLILHEI 910
            .|..||.:|||||..:....:.|...|:|.||:.||:||:|||.|||.:.||:|..|||.:|.||
Zfish   836 RILSLLCLGEIGRFMNFEGQKELKGVIMEAFGSPSEEVKSAASFALGNICVGNLGEYLPFMLKEI 900

  Fly   911 EVQPKRQYLLLHSLKEVISSLSVSPSGLAQLLPSVPSIWDQLFKHCECSEEGSRNVVAECLGKLV 975
            ..|.||||||||||||:||:||..     .|.|.|.:||..|||||||:|||:||:||||||||.
Zfish   901 GSQQKRQYLLLHSLKEMISALSAE-----SLKPHVENIWALLFKHCECAEEGTRNIVAECLGKLT 960

  Fly   976 LVNPDELLPQLQQALRSESATMRTVVVSSVKFTISDQPQPIDVLLKQNIGEFLFALRDPEPQVRR 1040
            ||:|.||||:|::.|.|.|...|:.||::|||||.|.|.|||.|||..||:||..|:||:..|||
Zfish   961 LVSPSELLPRLKKQLSSGSPLSRSTVVTAVKFTIVDHPMPIDSLLKGCIGDFLKTLQDPDLNVRR 1025

  Fly  1041 VALVAFNSAVHNKPSLVRDLLPTLLPWLYSETKVKSELIREVEMGPFKHTVDDGLDIRKAAFECM 1105
            ||||..|||.||||||:|.||.:|||.||:||:::.:|:|||||||||||||||||:||||||||
Zfish  1026 VALVMLNSAAHNKPSLIRGLLTSLLPHLYNETQIRKDLVREVEMGPFKHTVDDGLDVRKAAFECM 1090

  Fly  1106 YTLLEQGLDRVDVMQFLDHVQAGLCDHYDIKMLTYLMTARLAILCPDKVLLRLDQFIQQLRDTCT 1170
            ||||:..||.:|:.:||:||:.||.|||||||||::|.|||:.|||..|:.||::.::.|:.|||
Zfish  1091 YTLLDSCLDCLDIFEFLNHVEEGLKDHYDIKMLTFIMLARLSKLCPTAVVQRLERLVEPLKATCT 1155

  Fly  1171 HKVKANSVKQEYEKQDELKRSALRAVSALSQIPKANKNQQLVDFLKSIKETPELNKIFEYIQKDS 1235
            .||||.|||||:|||:||:|||:|||:||..|.:..|:..:.||...|:...|:..|||.:|.|.
Zfish  1156 TKVKAGSVKQEFEKQEELRRSAMRAVAALLSISEVEKSPAMADFANQIRSNAEMATIFESLQGDP 1220

  Fly  1236 ITGSSDIIVMDQS 1248
            :.|:  :..||.|
Zfish  1221 LAGA--VESMDTS 1231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cand1NP_609389.1 HEAT repeat 9..33 CDD:293787 21/23 (91%)
HEAT repeat 50..78 CDD:293787 25/27 (93%)
HEAT repeat 87..118 CDD:293787 24/30 (80%)
HEAT repeat 132..158 CDD:293787 13/26 (50%)
HEAT_EZ 147..200 CDD:463906 31/52 (60%)
HEAT repeat 171..200 CDD:293787 17/28 (61%)
HEAT repeat 212..242 CDD:293787 14/29 (48%)
HEAT repeat 253..277 CDD:293787 9/23 (39%)
HEAT repeat 513..538 CDD:293787 12/24 (50%)
HEAT repeat 545..569 CDD:293787 9/23 (39%)
HEAT repeat 609..636 CDD:293787 17/26 (65%)
HEAT repeat 647..676 CDD:293787 14/28 (50%)
HEAT repeat 982..1011 CDD:293787 15/28 (54%)
HEAT repeat 1022..1050 CDD:293787 16/27 (59%)
TIP120 1056..1210 CDD:430111 97/153 (63%)
cand2NP_001103988.1 HEAT repeat 11..33 CDD:293787 20/21 (95%)
HEAT repeat 53..74 CDD:293787 19/20 (95%)
HEAT repeat 87..116 CDD:293787 22/28 (79%)
HEAT repeat 137..160 CDD:293787 11/22 (50%)
HEAT_EZ 149..202 CDD:463906 31/52 (60%)
HEAT repeat 176..204 CDD:293787 17/27 (63%)
HEAT repeat 213..246 CDD:293787 16/32 (50%)
HEAT repeat 255..281 CDD:293787 10/25 (40%)
HEAT repeat 818..848 CDD:293787 11/29 (38%)
HEAT repeat 857..887 CDD:293787 15/29 (52%)
HEAT repeat 893..919 CDD:293787 18/25 (72%)
HEAT repeat 930..959 CDD:293787 21/28 (75%)
TIP120 1041..1203 CDD:430111 99/161 (61%)

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