DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cand1 and knd1

DIOPT Version :10

Sequence 1:NP_609389.1 Gene:Cand1 / 34403 FlyBaseID:FBgn0027568 Length:1248 Species:Drosophila melanogaster
Sequence 2:NP_593286.1 Gene:knd1 / 2542767 PomBaseID:SPAC1565.07C Length:1220 Species:Schizosaccharomyces pombe


Alignment Length:1340 Identity:296/1340 - (22%)
Similarity:547/1340 - (40%) Gaps:258/1340 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLEK-MTSTDKDFRFMATNDLMTELQKDSII--LDDESEKKVVRMVLKLLEDKNGEVQNLAVKCL 73
            ||:| :.|:|||.|:||.:||...|...:.:  |..||....:.::|:.|.|.:.|||..||:|:
pombe     6 LLKKYVESSDKDIRYMALSDLAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQQEAVRCV 70

  Fly    74 GPLVNKVKEIQVETIVDSLCANMMSNTEQLRDISSIGLKTVIAELPQSSNSLAPNVCQRITGKLS 138
            ..:.:|:.:.::::.|::|.:. ::..:....:|::.|..       |::::.|.|.:..|..:.
pombe    71 AIISSKIPQDKLKSTVENLLSG-VAGKKSKNYLSALSLLL-------SNSNVQPFVNKFYTSTVF 127

  Fly   139 TA---------IEKED----VSVKLESLDILADLLSRFGEFLVPFHSTILKALMPQ--------- 181
            .:         :.:|:    :.|..:||:|              :||. |..|:|.         
pombe   128 PSFLQILKQYNVAQEEFFAILCVVCDSLEI--------------YHSN-LSTLLPNNFELCIDVF 177

  Fly   182 ----LASSRQAVRKRTIVALSFLLIQANSNAYNGVIDHLLDGLENPPNPAAIRTYIQCLASICRQ 242
                ....|:.:.|:....||.:.:.....||..:|:.|..||......:.:...|:.|..|   
pombe   178 QKCTTQCQRELIIKKACYLLSDVSLYGPRFAYKYIIEVLDRGLGPSTQMSEVNISIKLLNEI--- 239

  Fly   243 AGHRLCNHIDRSMLLLSQYSQRDDDELREFCLQACEAFVMR---------CPDAINPHIPMILEL 298
                          |||  |:::.|....|...|...:..:         .||.:...:..:|.|
pombe   240 --------------LLS--SKKEKDSSTSFISTAVADYTNKILSLLKKEEAPDELTQKLLEVLGL 288

  Fly   299 CLNY-------------------ITYDPNYNYETDDGDTGNAMDTED--DEYVD-SEEYSDDDDM 341
            .|.|                   |:||||...:|:|.|     |..|  :|..| |..|.|::|:
pombe   289 LLEYQQVNILKIWPELHGLLISKISYDPNLISDTNDED-----DIADFLEEMSDYSSIYEDEEDV 348

  Fly   342 SWKVRRAAAKCLEVLISTRQELVEDFYRSLSPALIARFKEREENV--------KSDIFH------ 392
            ||.|||.:.|.:..:|.:|.|.:....::|..:::::..:|||:|        |....|      
pombe   349 SWIVRRESLKVVLSVILSRLEYLPIVLQALGTSVVSKLNDREESVCLISIEVLKQAFLHVPRWIE 413

  Fly   393 AYVALLKNTRLTDDVANDHDSMDQVSGPTSLLIEQLPLIVKAIQPLMREKSMKTRQDCFLLLREL 457
            .|.......|..:.:.:|..::...|      |..:.:|.|.:..|..:..:.       ::.||
pombe   414 VYATSNDRKRRYEGLPSDRSAISDTS------IYLVSVIGKHVSKLSDKTPLS-------IVSEL 465

  Fly   458 LNSLP--------GALGPY--LDSIVPGISYSLNDKSSTSNMKIE-SLGFLYSLLQGHPPHVFHP 511
            ||.:.        |....:  |.||:    |...| .||.::||: :|..|.|.:..........
pombe   466 LNLVTVIFSSRDLGVQSEFSNLSSII----YRFPD-FSTLDIKIKLNLVRLISAIISCGCEEIEN 525

  Fly   512 HIPLLVPLVVTSVFDPFYKIATEALLVLQQLVKVIRPLEPNAAKSDFDAPSFVGQVYSCTLQKLK 576
            ....:..::..:|.:.:.:::.|||:......|.|...:|....:||..      :...:||.|:
pombe   526 MESKMSTILSLAVQNNYPQLSYEALITELSFCKYIHKKQPTNVSTDFST------MIDSSLQLLE 584

  Fly   577 VTDVDQEVKERAIACMGQ--IIANMGDMLQNELAVCLPIFMERLKNEVTRLSSVKALTLIAASSL 639
            ....|.:|:...|..:.|  |:....|.....|...|.|..::|:.|.||.::.:||..|..|..
pombe   585 SKISDLKVRLALIDLVSQYVILFYEPDFDSIFLRRVLIILCKKLQEEPTRSAAARALCDIFMSVT 649

  Fly   640 RI----DLTPILHDVLPALGTFLRKNHRALKLHSLDLINKIVINYSSNFEANLLQTAIVEIPPLI 700
            .|    :.|.|..::|......:.|:........|:|: ::::.....:.|..|           
pombe   650 DITKIENGTKIYEEILQDCCRHIDKSGNEFTTAYLELL-EVLLKVGQKYLAESL----------- 702

  Fly   701 SDSDLHVAQYSLTLLSTVARRQPQALVGIHEQFLRSVLILVRSPLLQGSALNCTLELFQALVQTQ 765
                   .::.|.||....:|..:..|.|    |:.:||:..|.||:..  |..::...:.:|:.
pombe   703 -------LEHILGLLIETLKRNTENTVAI----LKCLLIIPLSILLKSK--NLLIDTIISHLQSS 754

  Fly   766 LSGLDYHS--LVSKLMAPVLGGNGD----VKSRATAGAP-SEVVQLHKQAYHSSAKCIAALTQQC 823
            ...|:..|  |:|:::| |:....|    :.|...|..| .|:|.|...|  :...||.    |.
pombe   755 TIHLNEESVCLLSRIIA-VISKEEDLELIINSFTCAQKPVEEMVTLALIA--AQLICIF----QS 812

  Fly   824 PQVATPLATKLI---TDLQKRNDTEIIFCLLTIGEI----GRHFDLSSIQVLPQTIIECFGATSE 881
            ..:.|.|....:   ::::.:..|.:||..|..|::    ..:||         ||.....:.:.
pombe   813 KAIVTSLNKSFMSPKSEVRIKVFTTLIFGQLDYGKLTLPANEYFD---------TIASNLNSPNA 868

  Fly   882 DVKAAASHALGAVSVGSLQTYLPL-ILHEIEVQPKRQYLLLHSLKEVISSLSVSPSGLAQLLPSV 945
            ||..||:.|||:::..|.:....| .|:..:...|.  |||.|....:....:.       ..:.
pombe   869 DVMKAAAIALGSLTSQSEKFIKELCALYVSDAYDKE--LLLISFLTFLKKSKID-------YETA 924

  Fly   946 PSIWDQLFKHCECSEEGS----RNVVAECLGKLVLVNPDELLPQLQQALRSESATMRTVVVSSVK 1006
            ..|||.|.|..|..::.|    |.:::||||.|:......|..:|:....||::....:.:|..:
pombe   925 DKIWDILSKDIENIKDFSTSPFRTLLSECLGLLICNESSSLYYKLELLSSSEASNHMLLSLSVFR 989

  Fly  1007 FTISDQPQPIDVLLKQNIGEFLFALRDPEPQVRRVALVAFNSAVHNKPSLVRDLLPTLLPWLYSE 1071
            |:::.....:....||...:.....::|:.:|.:..|....|.:.|:.|.:.|:...||..|.|:
pombe   990 FSLTLDCPKLKAYEKQFFEKAYKLFQNPDLEVSQETLQVIISVIKNRRSCIADVYNELLQGLISK 1054

  Fly  1072 TKVKSELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLEQGLDRVDVMQFLDHVQ-------AGL 1129
            :.|.|..:..|:||||:|.||:.::.|:..||.:|:||       |:.:.|:|:.       .||
pombe  1055 SSVDSSNVHVVQMGPFQHVVDNSINQRQLVFETLYSLL-------DIPESLNHLTHFLQVSVMGL 1112

  Fly  1130 CDHYDIKMLTYLMTARLAILCPDKVLLRLDQFIQQLRDTCTHKVKANSVKQEYEKQDELKRSALR 1194
            .|.:.||:::..:..:|....|..:..::|..::.||.....:....::|.:.:...:|.|||||
pombe  1113 EDEHYIKLVSLSILEKLVDCSPSIIDEQVDTILEALRKIIELRKTEKTLKTDSDNILDLVRSALR 1177

  Fly  1195 AVSAL-------------SQIPKANKNQQLVDFLKSIKET 1221
            .:..:             ||:.|...:.:.......||.|
pombe  1178 VLFTMKLKCDNPVISEFESQVQKGPYSLEYEGIKNEIKTT 1217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cand1NP_609389.1 HEAT repeat 9..33 CDD:293787 12/21 (57%)
HEAT repeat 50..78 CDD:293787 9/27 (33%)
HEAT repeat 87..118 CDD:293787 4/30 (13%)
HEAT repeat 132..158 CDD:293787 6/38 (16%)
HEAT_EZ 147..200 CDD:463906 13/65 (20%)
HEAT repeat 171..200 CDD:293787 9/41 (22%)
HEAT repeat 212..242 CDD:293787 7/29 (24%)
HEAT repeat 253..277 CDD:293787 6/23 (26%)
HEAT repeat 513..538 CDD:293787 4/24 (17%)
HEAT repeat 545..569 CDD:293787 4/23 (17%)
HEAT repeat 609..636 CDD:293787 9/26 (35%)
HEAT repeat 647..676 CDD:293787 4/28 (14%)
HEAT repeat 982..1011 CDD:293787 6/28 (21%)
HEAT repeat 1022..1050 CDD:293787 5/27 (19%)
TIP120 1056..1210 CDD:430111 44/173 (25%)
knd1NP_593286.1 HEAT_2 6..>75 CDD:433376 25/68 (37%)
TIP120 1039..1198 CDD:430111 42/165 (25%)

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