DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClpP and clpp

DIOPT Version :9

Sequence 1:NP_001260332.1 Gene:ClpP / 34402 FlyBaseID:FBgn0032229 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001018520.1 Gene:clpp / 553713 ZFINID:ZDB-GENE-030131-7860 Length:266 Species:Danio rerio


Alignment Length:225 Identity:146/225 - (64%)
Similarity:174/225 - (77%) Gaps:14/225 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSP 93
            |||:||||||||||||||:||||:|||||:||.|.|.::|.|:|||||||||:.|||||:|||||
Zfish    29 LIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSVASLVIAQLLFLQSESNNKPIHMYINSP 93

  Fly    94 GGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQGQ 158
            |||||:|.||||||||:..||:|||||||.||||||||||..|||:||||||||:|||||||:||
Zfish    94 GGVVTSGPAIYDTMQYILNPISTWCVGQAASMGSLLLAAGTAGMRHSLPNARIMVHQPSGGARGQ 158

  Fly   159 ATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMSGRMERDHFMTPEEAKVLGIIDHVLEHPPETV 223
            ||||.|.||||:|:|||:.|||.||.....|.:...||||.:|:|.||:..||||.||.|||:  
Zfish   159 ATDIAIQAEEILKLKRQINNIYSKHTGQLLETIESVMERDRYMSPMEAQDFGIIDKVLVHPPQ-- 221

  Fly   224 SETGPASDGGVTSGKAVPEECEKKRSKQAA 253
                        :|:..||..:|:.|..|:
Zfish   222 ------------AGQDEPELVQKEPSSPAS 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClpPNP_001260332.1 clpP 28..222 CDD:178955 140/192 (73%)
clppNP_001018520.1 clpP 27..222 CDD:178955 140/206 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590417
Domainoid 1 1.000 264 1.000 Domainoid score I1873
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4385
Inparanoid 1 1.050 290 1.000 Inparanoid score I2791
OMA 1 1.010 - - QHG58140
OrthoDB 1 1.010 - - D1274502at2759
OrthoFinder 1 1.000 - - FOG0004853
OrthoInspector 1 1.000 - - oto40374
orthoMCL 1 0.900 - - OOG6_100939
Panther 1 1.100 - - LDO PTHR10381
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2456
SonicParanoid 1 1.000 - - X3980
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.940

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