DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClpP and clpp

DIOPT Version :9

Sequence 1:NP_001260332.1 Gene:ClpP / 34402 FlyBaseID:FBgn0032229 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_002940664.2 Gene:clpp / 100135748 XenbaseID:XB-GENE-969408 Length:280 Species:Xenopus tropicalis


Alignment Length:235 Identity:144/235 - (61%)
Similarity:174/235 - (74%) Gaps:22/235 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VRNIN--------LIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSE 80
            :||::        |:|:||||||||||||||:||||:|||||:||.|.|.:||.|||||||||||
 Frog    54 LRNVHRGPPVLSPLVPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSLVVAQLLFLQSE 118

  Fly    81 NVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNAR 145
            :..||||:|||||||.|||||||||||||:..||.|||||||.||||||||||:.|||:||||:|
 Frog   119 SNKKPIHMYINSPGGSVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSSGMRHSLPNSR 183

  Fly   146 IMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMSGRMERDHFMTPEEAKVLG 210
            ||||||||||:||||||.|.||||:|:|:|:..||.||.:.....:...||||.:|:|.||:..|
 Frog   184 IMIHQPSGGARGQATDIAIQAEEILKLKKQINEIYAKHTRQPLSVIESVMERDRYMSPTEAQEFG 248

  Fly   211 IIDHVLEHPPETVSETGPASDGGVTSGKAVPEECEKKRSK 250
            |:|.||.|||:              .|:..||...||.::
 Frog   249 ILDKVLVHPPQ--------------DGEDEPELVIKKENQ 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClpPNP_001260332.1 clpP 28..222 CDD:178955 137/201 (68%)
clppXP_002940664.2 clpP 62..258 CDD:178955 135/195 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 258 1.000 Domainoid score I1965
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4385
Inparanoid 1 1.050 283 1.000 Inparanoid score I2809
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1274502at2759
OrthoFinder 1 1.000 - - FOG0004853
OrthoInspector 1 1.000 - - oto102303
Panther 1 1.100 - - LDO PTHR10381
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2456
SonicParanoid 1 1.000 - - X3980
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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