DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL4 and RD21A

DIOPT Version :10

Sequence 1:NP_609387.1 Gene:CtsL4 / 34401 FlyBaseID:FBgn0032228 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_564497.1 Gene:RD21A / 841122 AraportID:AT1G47128 Length:462 Species:Arabidopsis thaliana


Alignment Length:331 Identity:113/331 - (34%)
Similarity:182/331 - (54%) Gaps:35/331 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GNSSSANCKSEFEKF--KNNNNRKYLRTYDEMRSYKAFEENFKVIEEHNQNYKEGQTSFRLKPNI 87
            |..|.|...|.:|.:  |:...:......::.|.::.|::|.:.::|||    |...|:||....
plant    39 GGRSEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHN----EKNLSYRLGLTR 99

  Fly    88 FADMSTDGYLKGFLRLLKSNIEDSADNMAEI-----VGSPLMANVPESLDWRSKGFITPPYNQLS 147
            |||::.|.|..   :.|.:.:|...:....:     ||..|    |||:|||.||.:....:|..
plant   100 FADLTNDEYRS---KYLGAKMEKKGERRTSLRYEARVGDEL----PESIDWRKKGAVAEVKDQGG 157

  Fly   148 CGSCYAFSIAESIMG--QVFKRTGKILSLSKQQIVDCSVSHGNQGCVGGSLRNTLSYLQSTGGIM 210
            ||||:|||...::.|  |:.  ||.:::||:|::|||..|: |:||.||.:.....::...|||.
plant   158 CGSCWAFSTIGAVEGINQIV--TGDLITLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIKNGGID 219

  Fly   211 RDQDYPYVARKGKC-QFVPDLSVVNVTSWAILPVRDEQAIQAAVTHIGPVAISINASPKTFQLYS 274
            .|:||||....|.| |...:..||.:.|:..:|...|::::.||.| .|::|:|.|..:.||||.
plant   220 TDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAH-QPISIAIEAGGRAFQLYD 283

  Fly   275 DGIYDDPLCSSASVNHAMVVIGF----GKDYWILKNWWGQNWGENGYIRIRKGV----NMCGIAN 331
            .||:|.. |.: .::|.:|.:|:    ||||||::|.||::|||:||:|:.:.:    ..||||.
plant   284 SGIFDGS-CGT-QLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASSSGKCGIAI 346

  Fly   332 YAAYAI 337
            ..:|.|
plant   347 EPSYPI 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL4NP_609387.1 Inhibitor_I29 36..96 CDD:462410 16/61 (26%)
Peptidase_C1A 128..336 CDD:239068 85/218 (39%)
RD21ANP_564497.1 Inhibitor_I29 50..107 CDD:214853 15/60 (25%)
Peptidase_C1 137..352 CDD:425470 87/224 (39%)
GRAN 376..432 CDD:197621
Blue background indicates that the domain is not in the aligned region.

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