DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL4 and ctsw

DIOPT Version :10

Sequence 1:NP_609387.1 Gene:CtsL4 / 34401 FlyBaseID:FBgn0032228 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001039033.1 Gene:ctsw / 733785 XenbaseID:XB-GENE-963153 Length:303 Species:Xenopus tropicalis


Alignment Length:309 Identity:88/309 - (28%)
Similarity:152/309 - (49%) Gaps:38/309 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 NRKYLRTYDEMR-SYKAFEENFKVIEEHNQNYKEGQTSFRLKPNIFADMSTDGYLKGFLRLLKSN 107
            ||.| :|.:|.: ..:.|.||.|   |.::..:|...:.:.....|:|::.:.:   .:..|.:|
 Frog     5 NRSY-KTREEFKYRLRIFSENLK---EASRLQREELGTAQYGVTKFSDLTDEEF---SIYHLPTN 62

  Fly   108 IEDSADNMAEIVGSPLMANVPESLDWRSKGFITPPYNQLSCGSCYAFSIAESIMGQVFKRTGKIL 172
            |..:...:.:   |..:...|.|.|||::..|:...||.:|.||:||:...:|..| :...|:.:
 Frog    63 ILPTPPILKQ---SEEVLPFPTSCDWRTQNVISKAKNQRTCHSCWAFAAVANIEAQ-WAILGQTI 123

  Fly   173 SLSKQQIVDCSVSHGNQGCVGGSLRNTLSYLQSTGGIMRDQDYPYVARKGKCQ-------FVPDL 230
            |||:||::||:..  ..||.||...:....:...||:..::.|||......|:       ::.|.
 Frog   124 SLSEQQVIDCNTC--RNGCSGGYAWDAFMTVLQQGGLTSEKSYPYTGHVSNCRKGFEAVGWIHDF 186

  Fly   231 SVVNVTSWAILPVRDEQAIQAAVTHIGPVAISINASPKTFQLYSDGIYDD--PLCSSASVNHAMV 293
            .::.         ::|.|:.:.|.|.|.:.::||.:|  .:.|..||.|.  ..|....|:|.::
 Frog   187 EMLK---------KNETAMASHVAHKGTLTVTINKAP--LKHYQKGIVDTLRSNCDPNYVDHVVL 240

  Fly   294 VIGF---GK-DYWILKNWWGQNWGENGYIRIRKGVNMCGIANYAAYAIV 338
            ::|:   || ..|||||.||::|||.|:.|:.:..|.|||..|....||
 Frog   241 IVGYRGGGKLPQWILKNSWGEDWGEKGFFRMFRDKNACGITKYPVTCIV 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL4NP_609387.1 Inhibitor_I29 36..96 CDD:462410 13/52 (25%)
Peptidase_C1A 128..336 CDD:239068 69/220 (31%)
ctswNP_001039033.1 Inhibitor_I29 1..53 CDD:214853 13/51 (25%)
Peptidase_C1A 80..285 CDD:239068 69/218 (32%)

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