DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CtsL4 and Ctla2a

DIOPT Version :10

Sequence 1:NP_609387.1 Gene:CtsL4 / 34401 FlyBaseID:FBgn0032228 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001102585.1 Gene:Ctla2a / 498690 RGDID:1565540 Length:113 Species:Rattus norvegicus


Alignment Length:126 Identity:38/126 - (30%)
Similarity:64/126 - (50%) Gaps:20/126 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SEGNSSSANCKSEFEKFKNNNNRKYLRTY--DEMRSYKA-FEENFKVIEEHNQNYKEGQTSFRLK 84
            |...|...:..:|:|::|    :|:.:||  ||.|..:| :||:.|.||.||.:||:|:|||.:.
  Rat     3 SAAPSPDPSLDTEWEEWK----KKFGKTYSPDEERHRRAVWEESKKTIEAHNADYKQGKTSFYMG 63

  Fly    85 PNIFADMSTDGYLKGFLRLLKSNIEDSADNMAEIVGSPLMANVPESLDWRSKGFITPPYNQ 145
            .|.|:|::|:.:.:.....|....:.:.|           ..:||.|...|.  :||..:|
  Rat    64 LNQFSDLTTEEFRRNCCGSLMCRGKTTHD-----------LPIPEDLGKNSS--LTPERDQ 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL4NP_609387.1 Inhibitor_I29 36..96 CDD:462410 26/62 (42%)
Peptidase_C1A 128..336 CDD:239068 7/18 (39%)
Ctla2aNP_001102585.1 Inhibitor_I29 16..74 CDD:214853 26/61 (43%)

Return to query results.
Submit another query.