DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL4 and Ctsml1

DIOPT Version :10

Sequence 1:NP_609387.1 Gene:CtsL4 / 34401 FlyBaseID:FBgn0032228 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001389461.1 Gene:Ctsml1 / 498689 RGDID:1564827 Length:333 Species:Rattus norvegicus


Alignment Length:316 Identity:110/316 - (34%)
Similarity:184/316 - (58%) Gaps:26/316 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SEFEKFKNNNNRKYLRTY---DEMRSYKAFEENFKVIEEHNQNYKEGQTSFRLKPNIFADMSTDG 95
            :|::|:|    .||.:||   :|.:....:|:|.|.|:.||.....|:..|.::.|.|.||:.:.
  Rat    27 AEWQKWK----IKYEKTYSLEEEGQKRAVWEQNMKKIKLHNGENGLGKHGFTMEMNAFGDMTIEE 87

  Fly    96 YLKGFLRLLKSNI--EDSADNMAEIVGSPLMANVPESLDWRSKGFITPPYNQLSCGSCYAFSIAE 158
            :.|..:.:....:  |:|......:       |||..::||.:|::||...|..|.:|:|||:|.
  Rat    88 FRKLMIEIPIPTVKKENSVQKRQAV-------NVPNFINWRKRGYVTPVRRQGRCNACWAFSVAG 145

  Fly   159 SIMGQVFKRTGKILSLSKQQIVDCSVSHGNQGCVGGSLRNTLSYLQSTGGIMRDQDYPYVARKGK 223
            :|.||:|::||:::.||.|.:||||.:.||.||..|:....|.|::..||:..:..|||..::|.
  Rat   146 AIEGQMFRKTGQLIPLSVQNLVDCSRTQGNLGCYLGNTYFALQYVKENGGLESEATYPYEGKEGS 210

  Fly   224 CQFVPDLSVVNVTSWAILPVRDEQAIQAAVTHIGPVAISINASPKTFQLYSDGIYDDPLCSSASV 288
            |::.||.|..::.....:| ::|.|:..||..:||::::|:|..::|..|.:|||.:|.|:|:.|
  Rat   211 CRYHPDNSTASIAGIEFVP-KNEHALMNAVATLGPISVAIDARHESFLFYRNGIYHEPNCNSSVV 274

  Fly   289 NHAMVVIGF--------GKDYWILKNWWGQNWGENGYIRIRKGV-NMCGIANYAAY 335
            .|:|:::|:        |:.|||:||..|..||..||::|.|.. |.||||.||.|
  Rat   275 THSMLLVGYGFVGEESDGRKYWIVKNSMGNKWGNRGYMKIAKDQGNHCGIATYALY 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL4NP_609387.1 Inhibitor_I29 36..96 CDD:462410 19/62 (31%)
Peptidase_C1A 128..336 CDD:239068 85/217 (39%)
Ctsml1NP_001389461.1 Inhibitor_I29 29..87 CDD:214853 19/61 (31%)
Peptidase_C1A 115..331 CDD:239068 85/217 (39%)

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