DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL4 and ctsba

DIOPT Version :10

Sequence 1:NP_609387.1 Gene:CtsL4 / 34401 FlyBaseID:FBgn0032228 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_998501.1 Gene:ctsba / 406645 ZFINID:ZDB-GENE-040426-2650 Length:330 Species:Danio rerio


Alignment Length:260 Identity:67/260 - (25%)
Similarity:113/260 - (43%) Gaps:59/260 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 PLMA------NVPESLDWRSKGFITPPYNQL----SCGSCYAFSIAESIMGQV-FKRTGKI-LSL 174
            |:|.      .:|::.|.|.:....|...::    |||||:||..||:|..:| .....|: :.:
Zfish    68 PVMVQYTEGLKLPKNFDAREQWPNCPTLKEIRDQGSCGSCWAFGAAEAISDRVCIHSDAKVSVEI 132

  Fly   175 SKQQIVDCSVSHGNQGCVGGSLRNTLSYLQS----TGGIMRDQ-----------------DYPYV 218
            |.|.::.|..|.| .||.||.......:..:    |||:....                 ..|..
Zfish   133 SSQDLLTCCDSCG-MGCNGGYPSAAWDFWATEGLVTGGLYNSHIGCRPYTIEPCEHHVNGSRPPC 196

  Fly   219 ARKG--------KCQ--FVPDLSV---VNVTSWAILPVRDEQAIQAAVTHIGPV--AISINASPK 268
            :.:|        ||:  :.|....   ...||:::  ..::.:|.|.:...|||  |.::.   :
Zfish   197 SGEGGDTPNCDMKCEPGYSPSYKQDKHFGKTSYSV--PSNQNSIMAELFKNGPVEGAFTVY---E 256

  Fly   269 TFQLYSDGIYDDPLCSSASVNHAMVVIGFGKD----YWILKNWWGQNWGENGYIRIRKGVNMCGI 329
            .|.||..|:|.. :..|....||:.::|:|::    ||:..|.|..:||:|||.:|.:|.:.|||
Zfish   257 DFLLYKSGVYQH-MSGSPVGGHAIKILGWGEENGVPYWLAANSWNTDWGDNGYFKILRGEDHCGI 320

  Fly   330  329
            Zfish   321  320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL4NP_609387.1 Inhibitor_I29 36..96 CDD:462410
Peptidase_C1A 128..336 CDD:239068 65/248 (26%)
ctsbaNP_998501.1 Propeptide_C1 25..64 CDD:462365
Peptidase_C1A_CathepsinB 80..327 CDD:239111 65/248 (26%)
Blue background indicates that the domain is not in the aligned region.

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