DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL4 and Ctsz

DIOPT Version :10

Sequence 1:NP_609387.1 Gene:CtsL4 / 34401 FlyBaseID:FBgn0032228 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_899159.1 Gene:Ctsz / 252929 RGDID:708479 Length:306 Species:Rattus norvegicus


Alignment Length:233 Identity:68/233 - (29%)
Similarity:109/233 - (46%) Gaps:47/233 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 SPLMANVPESLDWRSKGFIT----------PPYNQLSCGSCYAFSIAESIMGQV-FKRTGKILS- 173
            ||  |::|::.|||:...:.          |.|    ||||:|.....::..:: .||.|...| 
  Rat    60 SP--ADLPKNWDWRNVNGVNYASVTRNQHIPQY----CGSCWAHGSTSALADRINIKRKGAWPST 118

  Fly   174 -LSKQQIVDCSVSHGNQG-CVGGSLRNTLSYLQSTG--------GIMRDQDYPYVARKGKC-QFV 227
             ||.|.::||    ||.| |.||:......|....|        ...:||:.....:.|.| :|.
  Rat   119 LLSVQNVIDC----GNAGSCEGGNDLPVWEYAHKHGIPDETCNNYQAKDQECDKFNQCGTCTEFK 179

  Fly   228 PDLSVVNVTSWAI-----LPVRDEQAIQAAVTHIGPVAISINASPKTFQLYSDGIYDDPLCSSAS 287
            ...::.|.|.|.:     |..|::  :.|.:...||::..|.|:.: ...|:.|||.: ..:.|.
  Rat   180 ECHTIQNYTLWRVGDYGSLSGREK--MMAEIYANGPISCGIMATER-MSNYTGGIYTE-YQNQAI 240

  Fly   288 VNHAMVVIGFGK-----DYWILKNWWGQNWGENGYIRI 320
            :||.:.|.|:|.     :|||::|.||:.|||.|::||
  Rat   241 INHIISVAGWGVSNDGIEYWIVRNSWGEPWGERGWMRI 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL4NP_609387.1 Inhibitor_I29 36..96 CDD:462410
Peptidase_C1A 128..336 CDD:239068 65/226 (29%)
CtszNP_899159.1 Peptidase_C1A_CathepsinX 64..305 CDD:239149 65/227 (29%)
Blue background indicates that the domain is not in the aligned region.

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