DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL4 and Ctso

DIOPT Version :10

Sequence 1:NP_609387.1 Gene:CtsL4 / 34401 FlyBaseID:FBgn0032228 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_808330.1 Gene:Ctso / 229445 MGIID:2139628 Length:312 Species:Mus musculus


Alignment Length:224 Identity:79/224 - (35%)
Similarity:121/224 - (54%) Gaps:20/224 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 NVPESLDWRSKGFITPPYNQLSCGSCYAFSIAESI-MGQVFKRTGKILS-LSKQQIVDCSVSHGN 188
            ::|...|||.|..:.|..||..||.|:|||:..:| ..:..:  ||.|. ||.||::|||.:  |
Mouse    98 SLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQ--GKSLDYLSVQQVIDCSFN--N 158

  Fly   189 QGCVGGSLRNTLSYLQSTG-GIMRDQDYPYVARKGKCQFVPD----LSVVNVTSWAILPVRDEQA 248
            .||:|||....|.:|..|. .::.|..||:.|..|:|:..|.    :||.:.:::......||.|
Mouse   159 SGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQAGVSVKDFSAYNFRGQEDEMA 223

  Fly   249 IQAAVTHIGPVAISINASPKTFQLYSDGIYDDPLCSSASVNHAMVVIGFGK----DYWILKNWWG 309
              .|:...||:.:.::|  .::|.|..||.... |||...|||:::.||.:    .||:::|.||
Mouse   224 --RALLSFGPLVVIVDA--MSWQDYLGGIIQHH-CSSGEANHAVLITGFDRTGNTPYWMVRNSWG 283

  Fly   310 QNWGENGYIRIRKGVNMCGIANYAAYAIV 338
            .:||..||..::.|.|:||||:..|...|
Mouse   284 SSWGVEGYAHVKMGGNVCGIADSVAAVFV 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL4NP_609387.1 Inhibitor_I29 36..96 CDD:462410
Peptidase_C1A 128..336 CDD:239068 78/218 (36%)
CtsoNP_808330.1 Peptidase_C1A 100..305 CDD:239068 76/213 (36%)
Blue background indicates that the domain is not in the aligned region.

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