DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL4 and cpr-2

DIOPT Version :10

Sequence 1:NP_609387.1 Gene:CtsL4 / 34401 FlyBaseID:FBgn0032228 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_507186.3 Gene:cpr-2 / 185355 WormBaseID:WBGene00000782 Length:326 Species:Caenorhabditis elegans


Alignment Length:224 Identity:68/224 - (30%)
Similarity:99/224 - (44%) Gaps:51/224 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 QLSCGSCYAFSIAESIMGQVFKRTGKILSLSKQQIVD-------CSVSHGNQGCVGGSLRNTLSY 202
            |.:||||:|||.||.|.    .||....:.::|.|:.       |.:|.| :||.||.......:
 Worm   105 QSNCGSCWAFSTAEVIS----DRTCIASNGTQQPIISPTDLLTCCGMSCG-EGCDGGFPYRAFQW 164

  Fly   203 LQSTGGIMRDQDY------PYVAR---------------KGKCQ------FVPDLSVVNVTSWAI 240
             .:..|::...||      ||..|               :..||      :..|.:..|    :.
 Worm   165 -WARRGVVTGGDYLGTGCKPYPIRPCNSDNCVNLQTPPCRLSCQPGYRTTYTNDKNYGN----SA 224

  Fly   241 LPV-RDEQAIQAAVTHIGPVAISINASPKTFQLYSDGIYDDPLCSSASVNHAMVVIGFGKD---- 300
            .|| |...||||.:.:.|||..:.... :.|:.|..|||.. :...:...||:.:||:|.:    
 Worm   225 YPVPRTVAAIQADIYYNGPVVAAFIVY-EDFEKYKSGIYRH-IAGRSKGGHAVKLIGWGTERGTP 287

  Fly   301 YWILKNWWGQNWGENGYIRIRKGVNMCGI 329
            ||:..|.||..|||:|..||.:||:.|||
 Worm   288 YWLAVNSWGSQWGESGTFRILRGVDECGI 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL4NP_609387.1 Inhibitor_I29 36..96 CDD:462410
Peptidase_C1A 128..336 CDD:239068 68/224 (30%)
cpr-2NP_507186.3 Peptidase_C1A_CathepsinB 84..323 CDD:239111 68/224 (30%)
Blue background indicates that the domain is not in the aligned region.

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